* using log directory 'd:/RCompile/CRANincoming/R-devel/RavenR.Rcheck'
* using R Under development (unstable) (2024-05-04 r86521 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'RavenR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RavenR' version '2.2.1'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [12s] Note_to_CRAN_maintainers
Maintainer: 'Robert Chlumsky <rchlumsk@uwaterloo.ca>'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RavenR' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 13.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
  'cran-comments.md'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [17s] NOTE
rvn_met_recordplot: no visible global function definition for 'na.omit'
Undefined global functions or variables:
  na.omit
Consider adding
  importFrom("stats", "na.omit")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'rvn_rvp_calib_template.Rd':
  \examples lines wider than 100 characters:
                           rvp_template_file =system.file("extdata","nithmodel.rvp_temp.rvp", package="RavenR"),

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [24s] ERROR
Running examples in 'RavenR-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rvn_rvh_write_subbasingroup
> ### Title: Write a subbasin group to Raven RVH format
> ### Aliases: rvn_rvh_write_subbasingroup
> 
> ### ** Examples
> 
> # load example rvh file
> nith <- system.file("extdata","Nith.rvh",package = "RavenR")
> rvh <- rvn_rvh_read(nith)
> 
> # query all subbasins upstream of basin 39
> rvh_upstream_of_39 <- rvn_rvh_query(rvh, subbasinID=39, condition="upstream_of")
> 
> # temporary filename
> tf <- file.path(tempdir(), 'mysubbasigroup.rvh')
> 
> # write this subbasin group to file
> rvn_rvh_write_subbasingroup(rvh=rvh_upstream_of_39, outfile=tf)
Error in iseq[i]:iseq[i + 1] : NA/NaN argument
Calls: rvn_rvh_write_subbasingroup -> %>% -> paste0
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... [16s] OK
* checking HTML version of manual ... [14s] OK
* DONE
Status: 1 ERROR, 3 NOTEs