* using log directory ‘/srv/hornik/tmp/CRAN_pretest/RadEro.Rcheck’
* using R Under development (unstable) (2024-10-15 r87238)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘RadEro/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RadEro’ version ‘1.0.3’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Arturo Catala <acatalae@gmail.com>’

New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RadEro’ can be installed ... [8s/8s] OK
* used C compiler: ‘Debian clang version 18.1.8 (12)’
* used C++ compiler: ‘Debian clang version 18.1.8 (12)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s/5s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'RadEro.Rd':
  \examples lines wider than 100 characters:
     RadEro_run(data = file.path(directory, "input-data_example.csv"), config = file.path(directory, "input-config_example.js"))

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [1s/1s] ERROR
Running examples in ‘RadEro-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RadEro
> ### Title: RadEro: Physically Based Compartmental Model for 137Cs Analysis
> ###   and Soil Redistribution Rates Estimation
> ### Aliases: RadEro-package RadEro
> ### Keywords: internal
> 
> ### ** Examples
> 
> # Example workflow for running the RadEro model:
> 
> # Step 1: Define your working directory
> directory <- tempdir()
> 
> # You can change this to any other directory if needed when running in real use.
> 
> # Step 2: Copy example files (.csv and .js) from the package to the working directory
> RadEro_example(directory)
Copied: input-data_example.csv to /tmp/Rtmp5dJhek/working_dir/RtmpCX0gXf
Copied: input-config_example.js to /tmp/Rtmp5dJhek/working_dir/RtmpCX0gXf
> # Those files can be used as templates for your own projects.
> 
> # Step 3: Execute the model with the example files
> RadEro_run(data = file.path(directory, "input-data_example.csv"), config = file.path(directory, "input-config_example.js"))
Starting RadEro_run...

 Current directory: /srv/hornik/tmp/CRAN_pretest/RadEro.Rcheck 
Error in fread(file.path(dir2, data), sep = ";", header = TRUE) : 
  File '/srv/hornik/tmp/CRAN_pretest/RadEro.Rcheck//tmp/Rtmp5dJhek/working_dir/RtmpCX0gXf/input-data_example.csv' does not exist or is non-readable. getwd()=='/srv/hornik/tmp/CRAN_pretest/RadEro.Rcheck'
Calls: RadEro_run -> fread -> stopf -> raise_condition -> signal
Execution halted
* checking PDF version of manual ... [3s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 2 NOTEs