library(testthat) library(Racmacs) context("Diagnostic plotting") map <- read.acmap(test_path("../testdata/testmap_h3subset.ace")) plot(map) test_that("plot a map", { export.plot.test( plot(map), "plot_map.pdf" ) }) test_that("plot map v table distances", { export.plot.test( plot_map_table_distance(map), "plot_map_table_distances.pdf" ) export.plotly.test( plotly_map_table_distance(map), "plot_map_table_distances.html" ) }) # plot_map_table_distance(map) # plotly_map_table_distance(map) # plot_ag_titers( # map = map, # antigen = "HK/434/96" # ) # # plotly_ag_titers( # map = map, # antigen = "HK/434/96" # ) # plot_sr_titers( # map = map, # serum = "BE/32V/92" # ) # # plotly_sr_titers( # map = map, # serum = "BE/32V/92" # ) # # plot_agStressPerTiter(map) # plotly_agStressPerTiter(map) # # plot_srStressPerTiter(map) # plotly_srStressPerTiter(map)