* using log directory ‘/srv/hornik/tmp/CRAN/RVAideMemoire.Rcheck’ * using R Under development (unstable) (2023-10-19 r85356) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 16.0.6 (15) GNU Fortran (Debian 13.2.0-4) 13.2.0 * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘RVAideMemoire/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RVAideMemoire’ version ‘0.9-83-5’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/4s] WARNING Maintainer: ‘Maxime HERVE ’ Strong dependencies not in mainstream repositories: mixOmics Suggests or Enhances not in mainstream repositories: glmmADMB Availability using Additional_repositories specification: glmmADMB yes http://r-forge.r-project.org mixOmics no ? * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘RVAideMemoire’ can be installed ... [7s/7s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking whether startup messages can be suppressed ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [19s/19s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) plotresid.Rd:21: Lost braces 21 | Response residuals are used for linear models, non linear models and generalized linear models based on an identity link (except with \code{"quasi"} distributions where response residuals are used only if \code{variance="constant"}). Pearson or studentized residuals are used whenever there is a link function which is not identity (and with \code{"quasi"} distributions when \code{variance} is not \code{"constant"}), except for code{betareg} models where standardized weighted residuals 2 are used (see \code{\link[betareg]{residuals.betareg}}). | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [22s/22s] OK * checking PDF version of manual ... [5s/5s] OK * checking HTML version of manual ... [4s/4s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 1 NOTE