* using log directory ‘/srv/hornik/tmp/CRAN_pretest/RStanTVA.Rcheck’ * using R Under development (unstable) (2025-03-23 r88038) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘RStanTVA/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RStanTVA’ version ‘0.1.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/6s] NOTE Maintainer: ‘Maximilian M. Rabe ’ New submission Possibly misspelled words in DESCRIPTION: Bundesen (8:108) RStan (8:244) StanTVA (3:39) Suggests or Enhances not in mainstream repositories: cmdstanr The Date field is over a month old. * checking package namespace information ... OK * checking package dependencies ... INFO Package suggested but not available for checking: ‘cmdstanr’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘RStanTVA’ can be installed ... [16s/16s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s/3s] OK * checking whether the package can be loaded with stated dependencies ... [3s/3s] OK * checking whether the package can be unloaded cleanly ... [3s/3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK * checking whether the namespace can be unloaded cleanly ... [4s/3s] OK * checking loading without being on the library search path ... [4s/4s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [18s/16s] NOTE parse_formula: multiple local function definitions for ‘inverse_link’ with different formal arguments parse_formula: multiple local function definitions for ‘link’ with different formal arguments ranef.stantvafit: no visible binding for global variable ‘param’ ranef.stantvafit: no visible binding for global variable ‘name’ ranef.stantvafit : : no visible binding for global variable ‘parameters’ ranef.stantvafit : : no visible global function definition for ‘filter’ ranef.stantvafit : : no visible binding for global variable ‘factor_txt’ ranef.stantvafit : : no visible binding for global variable ‘j’ read_tva_data: no visible binding for global variable ‘targets’ read_tva_data: no visible binding for global variable ‘distractors’ read_tva_data: no visible binding for global variable ‘report’ read_tva_data : : no visible binding for global variable ‘targets’ read_tva_data : : no visible binding for global variable ‘report’ read_tva_data : : no visible binding for global variable ‘distractors’ read_tva_data : : no visible binding for global variable ‘items’ read_tva_data: no visible binding for global variable ‘condition’ read_tva_data: no visible binding for global variable ‘items’ read_tva_data: no visible binding for global variable ‘S’ read_tva_data: no visible binding for global variable ‘D’ read_tva_data: no visible binding for global variable ‘exposure’ read_tva_data: no visible binding for global variable ‘R’ read_tva_data: no visible binding for global variable ‘E’ stantva_code: no visible global function definition for ‘normal’ stantva_code: no visible global function definition for ‘lkj_corr’ stantva_code: no visible binding for global variable ‘param’ stantva_code: no visible binding for global variable ‘group’ stantva_code: no visible binding for global variable ‘factor_txt’ translate_names: no visible binding for global variable ‘custom’ translate_names: no visible binding for global variable ‘index’ translate_names: no visible binding for global variable ‘group’ tva_report: no visible binding for global variable ‘n_items’ tva_report: no visible binding for global variable ‘n_distractors’ print,stantvafit: no visible binding for global variable ‘custom’ print,stantvafit: no visible binding for global variable ‘index’ print,stantvafit: no visible binding for global variable ‘group’ ranef,stantvafit: no visible binding for global variable ‘param’ ranef,stantvafit: no visible binding for global variable ‘name’ ranef,stantvafit : : no visible binding for global variable ‘parameters’ ranef,stantvafit : : no visible global function definition for ‘filter’ ranef,stantvafit : : no visible binding for global variable ‘factor_txt’ ranef,stantvafit : : no visible binding for global variable ‘j’ sampling,stantvamodel: no visible binding for global variable ‘d’ Undefined global functions or variables: D E R S condition custom d distractors exposure factor_txt filter group index items j lkj_corr n_distractors n_items name normal param parameters report targets Consider adding importFrom("stats", "D", "filter") to your NAMESPACE file. * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [8s/8s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs