* using log directory ‘/home/hornik/tmp/CRAN_special_valgrind/RSiena.Rcheck’ * using R Under development (unstable) (2025-07-05 r88387) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.2.0-19) 14.2.0 GNU Fortran (Debian 14.2.0-19) 14.2.0 * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * using option ‘--use-valgrind’ * checking for file ‘RSiena/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RSiena’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘RSiena’ can be installed ... [173s/177s] OK * used C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [42s/42s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [17m/17m] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed sienaTimeTest 201.410 0.336 201.540 sienaGOF-auxiliary 137.146 0.208 137.381 siena07 127.038 0.108 127.226 sienaGOF 96.732 0.312 96.906 includeInteraction 90.710 0.044 90.781 influenceTable 54.478 0.044 54.538 selectionTable 41.681 0.056 41.766 funnelPlot 39.306 0.048 39.375 updateTheta 32.447 0.044 32.470 Wald 28.682 0.036 28.729 RSiena-package 26.876 0.120 27.134 print.sienaTest 19.772 0.012 19.789 simstats0c 18.684 0.056 18.722 sienaFit 10.346 0.008 10.362 print.sienaEffects 6.054 0.012 6.068 edit.sienaEffects 5.925 0.004 5.931 getEffects 5.808 0.012 5.821 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [15m/15m] NOTE Running ‘parallel.R’ [15m/15m] Comparing ‘parallel.Rout’ to ‘parallel.Rout.save’ ...1,5d0 < ==844786== Memcheck, a memory error detector < ==844786== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al. < ==844786== Using Valgrind-3.24.0 and LibVEX; rerun with -h for copyright info < ==844786== Command: /home/hornik/tmp/R-d-gcc-valg/bin/exec/R -f parallel.R --restore --save --no-readline --vanilla < ==844786== 1029,1048d1023 < > proc.time() < user system elapsed < 902.029 1.027 902.511 < ==844786== < ==844786== HEAP SUMMARY: < ==844786== in use at exit: 222,880,624 bytes in 72,180 blocks < ==844786== total heap usage: 28,867,627 allocs, 28,795,447 frees, 2,700,540,928 bytes allocated < ==844786== < ==844786== LEAK SUMMARY: < ==844786== definitely lost: 0 bytes in 0 blocks < ==844786== indirectly lost: 0 bytes in 0 blocks < ==844786== possibly lost: 0 bytes in 0 blocks < ==844786== still reachable: 222,880,624 bytes in 72,180 blocks < ==844786== of which reachable via heuristic: < ==844786== newarray : 682,936 bytes in 317 blocks < ==844786== suppressed: 0 bytes in 0 blocks < ==844786== Rerun with --leak-check=full to see details of leaked memory < ==844786== < ==844786== For lists of detected and suppressed errors, rerun with: -s < ==844786== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) * checking PDF version of manual ... [5s/5s] OK * checking HTML version of manual ... [3s/3s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE