* using log directory ‘/srv/hornik/tmp/CRAN/ROCnReg.Rcheck’
* using R Under development (unstable) (2024-05-29 r86642)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.4 (1)
    Debian flang-new version 18.1.4 (1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘ROCnReg/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ROCnReg’ version ‘1.0-9’
* checking CRAN incoming feasibility ... [4s/7s] NOTE
Maintainer: ‘Maria Xose Rodriguez-Alvarez <mxrodriguez@uvigo.es>’

Found the following (possibly) invalid URLs:
  URL: https://research.fredhutch.org/diagnostic-biomarkers-center/en/datasets.html
    From: man/psa.Rd
    Status: 403
    Message: Forbidden

The Description field contains
  M.X. (2018) <arXiv:1806.00473>; Janes, H., and Pepe, M.S. (2009)
  Rodriguez-Alvarez, M.X. and Inacio, V. (20208) <arXiv:2003.13111> for
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘ROCnReg’ can be installed ... [8s/8s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
predictive.checks:
  function(object, statistics, ndensity, devnew)
predictive.checks.helper:
  function(y, yrep, marker, statistics, devnew, group, ndensity)

predict:
  function(object, ...)
predict.bbase.interaction.factor.by.curve.os:
  function(object, newx, newfactor)

predict:
  function(object, ...)
predict.bbase.os:
  function(object, newx)

Apparent methods for exported generics not registered:
  predictive.checks.helper
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [17s/17s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [23s/23s] OK
* checking PDF version of manual ... [4s/4s] OK
* checking HTML version of manual ... [2s/2s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs