* installing *source* package ‘RMSS’ ...
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether clang++-16 -std=gnu++17 accepts -g... yes
checking whether C++ compiler accepts -fstrict-aliasing... yes
checking for clang++-16 -std=gnu++17 option to support OpenMP... -fopenmp
checking C++ support for OpenMP... yes
checking OpenMP support for tasks... yes, with shared constant local variables
checking OpenMP support for custom reductions... yes
configure: Metrics disabled
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/autoconfig.R
config.status: creating src/autoconfig.h
** libs
using C++ compiler: ‘Debian clang version 16.0.6 (10)’
using C++17
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c Array2Cube.cpp -o Array2Cube.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c EnsembleModel.cpp -o EnsembleModel.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c Generate3D.cpp -o Generate3D.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c InitializeEnsembleModel.cpp -o InitializeEnsembleModel.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c NeighborhoodSearch.cpp -o NeighborhoodSearch.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c RInterface.cpp -o RInterface.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c RInterfaceCV.cpp -o RInterfaceCV.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c Scaling.cpp -o Scaling.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c SetDifference.cpp -o SetDifference.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -D__STDC_LIMIT_MACROS -DHAVE_RCPP -DTESTTHAT_DISABLED -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -fstrict-aliasing -fopenmp -fpic  -g -O3 -Wall -pedantic -c TrimPredictionResiduals.cpp -o TrimPredictionResiduals.o
clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RMSS.so Array2Cube.o EnsembleModel.o Generate3D.o InitializeEnsembleModel.o NeighborhoodSearch.o RInterface.o RInterfaceCV.o RcppExports.o Scaling.o SetDifference.o TrimPredictionResiduals.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/RMSS.Rcheck/00LOCK-RMSS/00new/RMSS/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RMSS)