* using log directory ‘/srv/hornik/tmp/CRAN/RGN.Rcheck’
* using R Under development (unstable) (2023-09-20 r85183)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 16.0.6 (15)
    GNU Fortran (Debian 13.2.0-3) 13.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘RGN/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RGN’ version ‘1.0.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/5s] NOTE
Maintainer: ‘David McInerney <dmcinern@gmail.com>’

New submission

Possibly misspelled words in DESCRIPTION:
  Qin (19:63)
  RGN (3:29, 17:57)
  al (19:71)
  et (19:67)

Found the following (possibly) invalid URLs:
  URL: http://www.bom.gov.au/water/hrs (moved to http://www.bom.gov.au/water/hrs/)
    From: man/BassRiverData.Rd
    Status: 301
    Message: Moved Permanently
  For content that is 'Moved Permanently', please change http to https,
  add trailing slashes, or replace the old by the new URL.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RGN’ can be installed ... [2s/2s] WARNING
Found the following significant warnings:
  Warning: CHARACTER expression will be truncated in assignment (255/270) at (1) [-Wcharacter-truncation]
See ‘/srv/hornik/tmp/CRAN/RGN.Rcheck/00install.out’ for details.
* used C compiler: ‘Debian clang version 16.0.6 (15)’
* used Fortran compiler: ‘GNU Fortran (Debian 13.2.0-3) 13.2.0’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [3s/3s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... NOTE
File ‘RGN/libs/RGN.so’:
  Found ‘_gfortran_st_write’, possibly from ‘write’ (Fortran), ‘print’
    (Fortran)
    Object: ‘hymod.o’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
* checking examples ... [0s/0s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [2s/2s] ERROR
  Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > library(RGN)
  > 
  > test_check("RGN")
  [ FAIL 5 | WARN 0 | SKIP 0 | PASS 5 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-hymod.R:17:3'): hymod ────────────────────────────────────────
  signif(par, digits = 7) (`actual`) not equal to c(146.7564, 0.3635988, 0.1895957, 0.99999, 0.7430698) (`expected`).
  
    `actual`: 400.00 0.50 0.10 0.20 0.10
  `expected`: 146.76 0.36 0.19 1.00 0.74
  ── Failure ('test-hymod.R:19:3'): hymod ────────────────────────────────────────
  signif(value, digits = 7) (`actual`) not equal to 6840.165 (`expected`).
  
    `actual`: 21100
  `expected`:  6840
  ── Failure ('test-hymod.R:20:3'): hymod ────────────────────────────────────────
  `counts` (`actual`) not equal to 367 (`expected`).
  
    `actual`:  11
  `expected`: 367
  ── Failure ('test-hymod.R:21:3'): hymod ────────────────────────────────────────
  info$nIter (`actual`) not equal to 29 (`expected`).
  
    `actual`:  1
  `expected`: 29
  ── Failure ('test-hymod.R:22:3'): hymod ────────────────────────────────────────
  info$termFlag (`actual`) not equal to 2 (`expected`).
  
    `actual`: 5
  `expected`: 2
  
  [ FAIL 5 | WARN 0 | SKIP 0 | PASS 5 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [2s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 2 NOTEs