library(testthat) ds_bad <- data.frame( record_id = 1:4, bad_logical = c(TRUE, TRUE, FALSE, TRUE), bad_Uppercase = c(4, 6, 8, 2) ) ds_good <- data.frame( record_id = 1:4, not_logical = c(1, 1, 0, 1), no_uppercase = c(4, 6, 8, 2) ) test_that("validate_no_logical -good", { ds <- validate_no_logical(ds_good, stop_on_error = TRUE) expect_equal(nrow(ds), 0) }) test_that("validate_no_logical -stop on error", { expect_error( validate_no_logical(ds_bad, stop_on_error = TRUE), "1 field\\(s\\) were logical/boolean. The REDCap API does not automatically convert boolean values to 0/1 values. Convert the variable with the `as.integer\\(\\)` function." ) }) test_that("validate_no_logical -concern dataset", { ds <- validate_no_logical(ds_bad) expect_equal(object=nrow(ds), expected=1, info="One logical field should be flagged") expect_equal(object=ds$field_name, expected="bad_logical") expect_equal(object=unname(ds$field_index), expected="2") }) # ---- redcap-repeat-instance -------------------------------------------------- # credential <- REDCapR::retrieve_credential_local( # path_credential = system.file("misc/example.credentials", package = "REDCapR"), # project_id = 1400 # ) test_that("repeat-instance: no column", { ds <- validate_repeat_instance(mtcars) expect_equal(object = nrow(ds), expected = 0) }) # test_that("repeat-instance: good integer", { # d <- # "test-data/vignette-repeating-write/data-block-matrix.csv" %>% # system.file(package = "REDCapR") %>% # readr::read_csv(show_col_types = FALSE) %>% # dplyr::mutate( # redcap_repeat_instance = as.integer(redcap_repeat_instance), # ) # # ds <- validate_repeat_instance(d) # expect_equal(object = nrow(ds), expected = 0) # }) # test_that("repeat-instance: bad double", { # d <- # "test-data/vignette-repeating-write/data-block-matrix.csv" %>% # system.file(package = "REDCapR") %>% # readr::read_csv(show_col_types = FALSE) # # ds_1 <- validate_repeat_instance(d) # # expect_equal(object=nrow(ds_1), expected=1, info="One uppercase field should be flagged") # expect_equal(object=ds_1$field_name, expected="redcap_repeat_instance") # expect_equal(object=ds_1$field_index, expected=3) # # ds_2 <- validate_for_write(d, convert_logical_to_integer = TRUE) # # expect_equal(object=nrow(ds_2), expected=1, info="One uppercase field should be flagged") # expect_equal(object=ds_2$field_name, expected="redcap_repeat_instance") # expect_equal(object=ds_2$field_index, expected=3) # }) # # test_that("repeat-instance: bad double -stop on error", { # d <- # "test-data/vignette-repeating-write/data-block-matrix.csv" %>% # system.file(package = "REDCapR") %>% # readr::read_csv(show_col_types = FALSE) # # expect_error( # validate_repeat_instance(d, stop_on_error = TRUE), # "The `redcap_repeat_instance` column should be an integer\\." # ) # })