Package check result: ERROR Check: CRAN incoming feasibility, Result: NOTE Maintainer: ‘Ha Nguyen ’ New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: Efron (10:478) Gu (10:544) Korotkevich (10:428) Ritchie (10:268) al (10:179, 10:279, 10:324, 10:380, 10:443, 10:487) et (10:176, 10:276, 10:321, 10:377, 10:440, 10:484) CRAN repository db overrides: X-CRAN-Comment: Archived on 2024-10-10 for policy violation. On Internet access. Found the following (possibly) invalid DOIs: DOI: https://doi.org/10.1002/cpz1.1036 From: inst/CITATION Status: 404 Message: Not Found Check: examples, Result: ERROR Running examples in ‘RCPA-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: processAgilent > ### Title: Process and normalize agilent-based dataset > ### Aliases: processAgilent > > ### ** Examples > > ## No test: > library(RCPA) > geoId <- "GSE28522" > > downloadPath <- file.path(tempdir(), geoId) > fileList <- RCPA::downloadGEO(GEOID = geoId, protocol = "agilent", + platform ="GPL4133", destDir = downloadPath) The destination directory does not exist. It will be created. Found 1 file(s) GSE28522_series_matrix.txt.gz Error in max(getOption("timeout"), 120) : invalid 'type' (list) of argument Calls: ... .downloadGEOObject -> getGEO -> getAndParseGSEMatrices -> downloadFile Execution halted Check: for detritus in the temp directory, Result: NOTE Found the following files/directories: ‘calibre_7.19.0_tmp_nwihofdr’ ‘calibre_7.19.0_tmp_qy9q84yw’