Package check result: OK

Changes to worse in reverse depends:

Package: MBNMAdose
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
  1344x960 pixels, 8 bits/pixel, 256 colors in palette
  Reducing image to 8 bits/pixel, grayscale
  Input IDAT size = 24899 bytes
  Input file size = 25793 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21014
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 20074
    zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 20002
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 20002
  
  Output IDAT size = 20002 bytes (4897 bytes decrease)
  Output file size = 20080 bytes (5713 bytes = 22.15% decrease)
  
  --- finished re-building ‘consistencychecking-3.Rmd’
  
  --- re-building ‘dataexploration-1.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 218046 bytes
  Input file size = 218436 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 160681
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 160681
  
  Output IDAT size = 160681 bytes (57365 bytes decrease)
  Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 144160 bytes
  Input file size = 144442 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 108770
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 108770
  
  Output IDAT size = 108770 bytes (35390 bytes decrease)
  Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 43024 bytes
  Input file size = 43162 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34497
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34497
  
  Output IDAT size = 34497 bytes (8527 bytes decrease)
  Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 34591 bytes
  Input file size = 34717 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28108
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28108
  
  Output IDAT size = 28108 bytes (6483 bytes decrease)
  Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 157316 bytes
  Input file size = 157622 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 120267
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 120267
  
  Output IDAT size = 120267 bytes (37049 bytes decrease)
  Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
  
  
  Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
  Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
  non-numeric argument to mathematical function
  --- failed re-building ‘dataexploration-1.Rmd’
  
  --- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
  --- finished re-building ‘mbnmadose-overview.Rmd’
  
  --- re-building ‘metaregression-6.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 73874 bytes
  Input file size = 74060 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 68369
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 66755
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 66755
  
  Output IDAT size = 66755 bytes (7119 bytes decrease)
  Output file size = 66833 bytes (7227 bytes = 9.76% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 84413 bytes
  Input file size = 84611 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 73206
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 73206
  
  Output IDAT size = 73206 bytes (11207 bytes decrease)
  Output file size = 73284 bytes (11327 bytes = 13.39% decrease)
  
  --- finished re-building ‘metaregression-6.Rmd’
  
  --- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 16137 bytes
  Input file size = 16227 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13294
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 13294
  
  Output IDAT size = 13294 bytes (2843 bytes decrease)
  Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
  
  
  Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
  Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
  non-numeric argument to mathematical function
  --- failed re-building ‘nma_in_mbnmadose.Rmd’
  
  --- re-building ‘outputs-4.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 62832 bytes
  Input file size = 62994 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57209
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 56621
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 56621
  
  Output IDAT size = 56621 bytes (6211 bytes decrease)
  Output file size = 56699 bytes (6295 bytes = 9.99% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 60481 bytes
  Input file size = 60643 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 53663
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 53663
  
  Output IDAT size = 53663 bytes (6818 bytes decrease)
  Output file size = 53741 bytes (6902 bytes = 11.38% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 65799 bytes
  Input file size = 65973 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57178
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57178
  
  Output IDAT size = 57178 bytes (8621 bytes decrease)
  Output file size = 57256 bytes (8717 bytes = 13.21% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 115169 bytes
  Input file size = 115415 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 95600
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 95600
  
  Output IDAT size = 95600 bytes (19569 bytes decrease)
  Output file size = 95678 bytes (19737 bytes = 17.10% decrease)
  
  --- finished re-building ‘outputs-4.Rmd’
  
  --- re-building ‘predictions-5.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 100242 bytes
  Input file size = 100464 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85496
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85496
  
  Output IDAT size = 85496 bytes (14746 bytes decrease)
  Output file size = 85574 bytes (14890 bytes = 14.82% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 128171 bytes
  Input file size = 128429 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 103694
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 103694
  
  Output IDAT size = 103694 bytes (24477 bytes decrease)
  Output file size = 103772 bytes (24657 bytes = 19.20% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 46719 bytes
  Input file size = 46857 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 42750
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 42750
  
  Output IDAT size = 42750 bytes (3969 bytes decrease)
  Output file size = 42828 bytes (4029 bytes = 8.60% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 129062 bytes
  Input file size = 129320 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 99265
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 99265
  
  Output IDAT size = 99265 bytes (29797 bytes decrease)
  Output file size = 99343 bytes (29977 bytes = 23.18% decrease)
  
  --- finished re-building ‘predictions-5.Rmd’
  
  --- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 101206 bytes
  Input file size = 101428 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 78412
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 78412
  
  Output IDAT size = 78412 bytes (22794 bytes decrease)
  Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 33742 bytes
  Input file size = 33868 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26932
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26932
  
  Output IDAT size = 26932 bytes (6810 bytes decrease)
  Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 34220 bytes
  Input file size = 34346 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28128
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28128
  
  Output IDAT size = 28128 bytes (6092 bytes decrease)
  Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
  1344x960 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 31005 bytes
  Input file size = 31119 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25151
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25151
  
  Output IDAT size = 25151 bytes (5854 bytes decrease)
  Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
  
  
  Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
  Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
  non-numeric argument to mathematical function
  --- failed re-building ‘runmbnmadose-2.Rmd’
  
  SUMMARY: processing the following files failed:
    ‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: MBNMAtime
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
  672x240 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 19052 bytes
  Input file size = 19154 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14912
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14912
  
  Output IDAT size = 14912 bytes (4140 bytes decrease)
  Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
  672x240 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 33676 bytes
  Input file size = 33802 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26019
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26019
  
  Output IDAT size = 26019 bytes (7657 bytes decrease)
  Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 31267 bytes
  Input file size = 31381 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25404
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25404
  
  Output IDAT size = 25404 bytes (5863 bytes decrease)
  Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
  
  --- finished re-building ‘consistencychecking-3.Rmd’
  
  --- re-building ‘dataexploration-1.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 19072 bytes
  Input file size = 19174 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16320
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16320
  
  Output IDAT size = 16320 bytes (2752 bytes decrease)
  Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 119981 bytes
  Input file size = 120227 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 88771
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 88771
  
  Output IDAT size = 88771 bytes (31210 bytes decrease)
  Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 25739 bytes
  Input file size = 25853 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19919
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19919
  
  Output IDAT size = 19919 bytes (5820 bytes decrease)
  Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 131032 bytes
  Input file size = 131290 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94428
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94428
  
  Output IDAT size = 94428 bytes (36604 bytes decrease)
  Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 79747 bytes
  Input file size = 79933 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57953
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57953
  
  Output IDAT size = 57953 bytes (21794 bytes decrease)
  Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 64122 bytes
  Input file size = 64284 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 45061
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 45061
  
  Output IDAT size = 45061 bytes (19061 bytes decrease)
  Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 89230 bytes
  Input file size = 89428 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66537
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66537
  
  Output IDAT size = 66537 bytes (22693 bytes decrease)
  Output file size = 66615 bytes (22813 bytes = 25.51% decrease)
  
  --- finished re-building ‘dataexploration-1.Rmd’
  
  --- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
  --- finished re-building ‘mbnmatime-overview.Rmd’
  
  --- re-building ‘outputs-4.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 91483 bytes
  Input file size = 91693 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66638
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 66638
  
  Output IDAT size = 66638 bytes (24845 bytes decrease)
  Output file size = 66716 bytes (24977 bytes = 27.24% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 21068 bytes
  Input file size = 21170 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17717
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17717
  
  Output IDAT size = 17717 bytes (3351 bytes decrease)
  Output file size = 17795 bytes (3375 bytes = 15.94% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 58981 bytes
  Input file size = 59143 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 41846
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 41846
  
  Output IDAT size = 41846 bytes (17135 bytes decrease)
  Output file size = 41924 bytes (17219 bytes = 29.11% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 81657 bytes
  Input file size = 81843 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 62025
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 62025
  
  Output IDAT size = 62025 bytes (19632 bytes decrease)
  Output file size = 62103 bytes (19740 bytes = 24.12% decrease)
  
  --- finished re-building ‘outputs-4.Rmd’
  
  --- re-building ‘predictions-5.Rmd’ using rmarkdown
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 67004 bytes
  Input file size = 67178 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 52613
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 52613
  
  Output IDAT size = 52613 bytes (14391 bytes decrease)
  Output file size = 52691 bytes (14487 bytes = 21.57% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
  672x288 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 31412 bytes
  Input file size = 31526 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24425
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24425
  
  Output IDAT size = 24425 bytes (6987 bytes decrease)
  Output file size = 24503 bytes (7023 bytes = 22.28% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 75148 bytes
  Input file size = 75334 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57911
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57911
  
  Output IDAT size = 57911 bytes (17237 bytes decrease)
  Output file size = 57989 bytes (17345 bytes = 23.02% decrease)
  
  ** Processing: /home/hornik/tmp/CRAN_recheck/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
  672x480 pixels, 3x8 bits/pixel, RGB
  Input IDAT size = 53872 bytes
  Input file size = 54022 bytes
  
  Trying:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 40192
    zc = 9  zm = 8  zs = 1  f = 0
    zc = 1  zm = 8  zs = 2  f = 0
    zc = 9  zm = 8  zs = 3  f = 0
    zc = 9  zm = 8  zs = 0  f = 5
    zc = 9  zm = 8  zs = 1  f = 5
    zc = 1  zm = 8  zs = 2  f = 5
    zc = 9  zm = 8  zs = 3  f = 5
                                 
  Selecting parameters:
    zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 40192
  
  Output IDAT size = 40192 bytes (13680 bytes decrease)
  Output file size = 40270 bytes (13752 bytes = 25.46% decrease)
  
  --- finished re-building ‘predictions-5.Rmd’
  
  --- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
  
  Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
  Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
  non-numeric argument to mathematical function
  --- failed re-building ‘runmbnmatime-2.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘runmbnmatime-2.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: simmr
Check: tests
New result: ERROR
    Running ‘testthat.R’ [61s/61s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(simmr)
    Loading required package: R2jags
    Loading required package: rjags
    Loading required package: coda
    Linked to JAGS 4.3.2
    Loaded modules: basemod,bugs
    
    Attaching package: 'R2jags'
    
    The following object is masked from 'package:coda':
    
        traceplot
    
    Loading required package: ggplot2
    > library(vdiffr)
    > 
    > co <- function(expr) capture.output(expr, file = "NUL")
    > 
    > test_check("simmr")
    [ FAIL 1 | WARN 0 | SKIP 4 | PASS 256 ]
    
    ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
    • On CRAN (4): 'test_simmr_mcmc_full.R:27:3', 'test_simmr_mcmc_full.R:52:3',
      'test_simmr_mcmc_full.R:75:3', 'test_simmr_mcmc_full.R:159:3'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-simmr_ffvb.R:86:3'): simmr_ffvb_compare ────────────────────────
    Error in `eval(code, test_env)`: Assertion on 'diff_sig < 0.01' failed: Must be TRUE.
    Backtrace:
        ▆
     1. └─checkmate::assert_true(diff_sig < 0.01) at test-simmr_ffvb.R:86:3
     2.   └─checkmate::makeAssertion(x, res, .var.name, add)
     3.     └─checkmate:::mstop(...)
    
    [ FAIL 1 | WARN 0 | SKIP 4 | PASS 256 ]
    Error: Test failures
    Execution halted