* using log directory 'd:/RCompile/CRANincoming/R-devel/R2D2ordinal.Rcheck' * using R Under development (unstable) (2025-02-18 r87748 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'R2D2ordinal/DESCRIPTION' ... OK * this is package 'R2D2ordinal' version '0.0.0.9000' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Eric Yanchenko ' New submission Version contains large components (0.0.0.9000) Non-FOSS package license (`use_mit_license()`, `use_gpl3_license()` or friends to pick a license) Possibly misspelled words in DESCRIPTION: Psuedo (6:98) Yanchenko (6:164) pdf (6:223) The Title field should be in title case. Current version is: 'Implements pseudo-R2D2 prior for ordinal regression.' In title case that is: 'Implements Pseudo-R2D2 Prior for Ordinal Regression.' The Description field should not start with the package name, 'This package' or similar. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'R2D2ordinal' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.3.0' * checking C++ specification ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. Non-standard license specification: `use_mit_license()`, `use_gpl3_license()` or friends to pick a license Standardizable: FALSE * checking top-level files ... NOTE Non-standard files/directories found at top level: 'R2D2ordinal' 'Vignettes' * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... WARNING '::' or ':::' imports not declared from: 'GIGrvg' 'LaplacesDemon' 'extraDistr' * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s] NOTE dcut: no visible global function definition for 'pnorm' dcut: no visible global function definition for 'dnorm' find_param : obj_fun : findR2: no visible global function definition for 'rnorm' find_param : obj_fun : findR2: no visible global function definition for 'qnorm' find_param : obj_fun: no visible global function definition for 'quantile' find_param : obj_fun: no visible global function definition for 'qbeta' find_param: no visible global function definition for 'optim' llike: no visible global function definition for 'pnorm' ord_r2d2: no visible global function definition for 'runif' Undefined global functions or variables: dnorm optim pnorm qbeta qnorm quantile rnorm runif Consider adding importFrom("stats", "dnorm", "optim", "pnorm", "qbeta", "qnorm", "quantile", "rnorm", "runif") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking files in 'vignettes' ... WARNING Files in the 'vignettes' directory but no files in 'inst/doc': 'pr2d2ord.Rmd' 'pr2d2ord.html' 'pr2d2ord_cache/html/__packages' 'pr2d2ord_cache/html/unnamed-chunk-1_f3b577d4067bd38256bc7a0d1f80cc06.RData' 'pr2d2ord_cache/html/unnamed-chunk-1_f3b577d4067bd38256bc7a0d1f80cc06.rdb' 'pr2d2ord_cache/html/unnamed-chunk-1_f3b577d4067bd38256bc7a0d1f80cc06.rdx' 'pr2d2ord_cache/html/unnamed-chunk-2_c8fbd4d4b1864f924b37e9fe0f9c7e3b.RData' 'pr2d2ord_cache/html/unnamed-chunk-2_c8fbd4d4b1864f924b37e9fe0f9c7e3b.rdb' 'pr2d2ord_cache/html/unnamed-chunk-2_c8fbd4d4b1864f924b37e9fe0f9c7e3b.rdx' 'pr2d2ord_cache/html/unnamed-chunk-3_0f3715972d38c71c608650a7b03916d6.RData' 'pr2d2ord_cache/html/unnamed-chunk-3_0f3715972d38c71c608650a7b03916d6.rdb' 'pr2d2ord_cache/html/unnamed-chunk-3_0f3715972d38c71c608650a7b03916d6.rdx' 'pr2d2ord_files/figure-html/unnamed-chunk-4-1.png' 'pr2d2ord_files/figure-html/unnamed-chunk-4-2.png' 'pr2d2ord_files/figure-html/unnamed-chunk-4-3.png' 'pr2d2ord_files/figure-html/unnamed-chunk-4-4.png' Package has no Sweave vignette sources and no VignetteBuilder field. * checking examples ... NONE * checking package vignettes ... NOTE Package has 'vignettes' subdirectory but apparently no vignettes. Perhaps the 'VignetteBuilder' information is missing from the DESCRIPTION file? * checking PDF version of manual ... [35s] OK * checking HTML version of manual ... OK * checking for code which exercises the package ... WARNING No examples, no tests, no vignettes * DONE Status: 3 WARNINGs, 5 NOTEs