* using log directory ‘/srv/hornik/tmp/CRAN_pretest/R2D2ordinal.Rcheck’ * using R Under development (unstable) (2025-02-17 r87739) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘R2D2ordinal/DESCRIPTION’ ... OK * this is package ‘R2D2ordinal’ version ‘0.0.0.9000’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [2s/2s] NOTE Maintainer: ‘Eric Yanchenko ’ New submission Version contains large components (0.0.0.9000) Non-FOSS package license (`use_mit_license()`, `use_gpl3_license()` or friends to pick a license) Possibly misspelled words in DESCRIPTION: Psuedo (6:98) Yanchenko (6:164) The Title field should be in title case. Current version is: ‘Implements pseudo-R2D2 prior for ordinal regression.’ In title case that is: ‘Implements Pseudo-R2D2 Prior for Ordinal Regression.’ The Description field should not start with the package name, 'This package' or similar. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘R2D2ordinal’ can be installed ... [65s/63s] OK * used C++ compiler: ‘Debian clang version 19.1.7 (1+b1)’ * checking C++ specification ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. Non-standard license specification: `use_mit_license()`, `use_gpl3_license()` or friends to pick a license Standardizable: FALSE * checking top-level files ... NOTE Non-standard files/directories found at top level: ‘R2D2ordinal’ ‘Vignettes’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/1s] OK * checking whether the package can be loaded with stated dependencies ... [2s/1s] OK * checking whether the package can be unloaded cleanly ... [2s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/1s] OK * checking whether the namespace can be unloaded cleanly ... [2s/1s] OK * checking loading without being on the library search path ... [3s/3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... WARNING '::' or ':::' imports not declared from: ‘GIGrvg’ ‘LaplacesDemon’ ‘extraDistr’ * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/7s] NOTE dcut: no visible global function definition for ‘pnorm’ dcut: no visible global function definition for ‘dnorm’ find_param : obj_fun : findR2: no visible global function definition for ‘rnorm’ find_param : obj_fun : findR2: no visible global function definition for ‘qnorm’ find_param : obj_fun: no visible global function definition for ‘quantile’ find_param : obj_fun: no visible global function definition for ‘qbeta’ find_param: no visible global function definition for ‘optim’ llike: no visible global function definition for ‘pnorm’ ord_r2d2: no visible global function definition for ‘runif’ Undefined global functions or variables: dnorm optim pnorm qbeta qnorm quantile rnorm runif Consider adding importFrom("stats", "dnorm", "optim", "pnorm", "qbeta", "qnorm", "quantile", "rnorm", "runif") to your NAMESPACE file. * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... NONE * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for code which exercises the package ... WARNING No examples, no tests, no vignettes * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 WARNINGs, 4 NOTEs