* installing *source* package ‘QFASA’ ... ** using staged installation ** libs #/home/hornik/tmp/R-d-clang-18/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp','-O0 -g', safebounds=FALSE,safeunload=FALSE)" /home/hornik/tmp/R-d-clang-18/bin/Rscript --vanilla -e "TMB::compile('ErrorModelSimpleEquant.cpp',safebounds=FALSE,safeunload=FALSE)" Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 18.1.8 (9)’ make[1]: Entering directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include" -I"/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_ErrorModelSimpleEquant -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c ErrorModelSimpleEquant.cpp -o ErrorModelSimpleEquant.o In file included from ErrorModelSimpleEquant.cpp:3: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from ErrorModelSimpleEquant.cpp:3: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ 3 warnings generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o ErrorModelSimpleEquant.so ErrorModelSimpleEquant.o -L/home/hornik/tmp/R-d-clang-18/lib -lR make[1]: Leaving directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' make[1]: Entering directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' make[1]: Leaving directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' [1] 0 #/home/hornik/tmp/R-d-clang-18/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp','-O0 -g',safebounds=FALSE,safeunload=FALSE)" /home/hornik/tmp/R-d-clang-18/bin/Rscript --vanilla -e "TMB::compile('CommonDiet.cpp',safebounds=FALSE,safeunload=FALSE)" Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 18.1.8 (9)’ make[1]: Entering directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include" -I"/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_CommonDiet -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c CommonDiet.cpp -o CommonDiet.o In file included from CommonDiet.cpp:7: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from CommonDiet.cpp:7: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ 3 warnings generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o CommonDiet.so CommonDiet.o -L/home/hornik/tmp/R-d-clang-18/lib -lR make[1]: Leaving directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' make[1]: Entering directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' make[1]: Leaving directory '/srv/hornik/tmp/CRAN/QFASA.Rcheck/00_pkg_src/QFASA/src' [1] 0 # Comment here preserves the prior tab installing to /srv/hornik/tmp/CRAN/QFASA.Rcheck/00LOCK-QFASA/00new/QFASA/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (QFASA)