* using log directory 'd:/RCompile/CRANincoming/R-devel/PregnancyIdentifier.Rcheck' * using R Under development (unstable) (2026-03-06 r89561 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-03-07 07:01:13 UTC * checking for file 'PregnancyIdentifier/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'PregnancyIdentifier' version '3.1.1' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Adam Black ' New submission Possibly misspelled words in DESCRIPTION: CDM (4:31, 12:54) HIPPS (13:7) OMOP (3:45, 12:49) al (13:45) et (13:42) Found the following (possibly) invalid URLs: URL: https://darwin-eu-dev.github.io/PregnancyIdentifier (moved to https://darwin-eu-dev.github.io/PregnancyIdentifier/) From: DESCRIPTION man/PregnancyIdentifier-package.Rd Status: 301 Message: Moved Permanently URL: https://darwin-eu.github.io/PregnancyIdentifier/ From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/algorithm.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/esd.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/export.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/hip.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/merge.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/articles/pps.html From: README.md Status: 404 Message: Not Found URL: https://darwin-eu.github.io/PregnancyIdentifier/issues/ From: DESCRIPTION man/PregnancyIdentifier-package.Rd Status: 404 Message: Not Found For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'PregnancyIdentifier' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [19s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [17m] ERROR Running 'testthat.R' [17m] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(PregnancyIdentifier) > > test_check("PregnancyIdentifier") Starting 2 test processes. > test-compareWithPET-pregnancyExtension.R: trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/empty_cdm_5.4.zip' > test-attrition.R: trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/empty_cdm_5.4.zip' > test-compareWithPET-pregnancyExtension.R: Content type 'application/zip' length 772029174 bytes (736.3 MB) > test-attrition.R: Content type 'application/zip' length 772029174 bytes (736.3 MB) > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-compareWithPET-pregnancyExtension.R: = > test-attrition.R: = > test-attrition.R: = > test-attrition.R: downloaded 736.3 MB > test-attrition.R: > test-attrition.R: > test-attrition.R: Download completed! > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: = > test-compareWithPET-pregnancyExtension.R: downloaded 736.3 MB > test-compareWithPET-pregnancyExtension.R: > test-compareWithPET-pregnancyExtension.R: > test-compareWithPET-pregnancyExtension.R: Download completed! > test-compareWithPET-pregnancyExtension.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-compareWithPET-pregnancyExtension.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET-pregnancyExtension.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-compareWithPET-pregnancyExtension.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET-pregnancyExtension.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-compareWithPET-pregnancyExtension.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-compareWithPET-pregnancyExtension.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_extension_out/export > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET-pregnancyExtension.R: Reading file: 'D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_extension_export/pet_comparison_summarised_result.csv'. > test-compareWithPET-pregnancyExtension.R: Converting to summarised_result: 'D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_extension_export/pet_comparison_summarised_result.csv'. > test-attrition.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-attrition.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-attrition.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_attrition_pipeline/export > test-compareWithPET.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-compareWithPET.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-compareWithPET.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-compareWithPET.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-compareWithPET.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_out/export > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-compareWithPET.R: Reading file: 'D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_export/pet_comparison_summarised_result.csv'. > test-compareWithPET.R: Converting to summarised_result: 'D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_compareWithPET_export/pet_comparison_summarised_result.csv'. > test-attrition.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-attrition.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-attrition.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_attrition_consistency/export Saving _problems/test-db-spark-7.R > test-deliveryMode.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-deliveryMode.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-deliveryMode.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-deliveryMode.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-deliveryMode.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-deliveryMode.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-deliveryMode.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/testHipps/export > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-attrition.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-attrition.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_attrition_export_out/export > test-attrition.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-attrition.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-attrition.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_attrition_export_dir > test-exportPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-exportPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-exportPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-exportPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-exportPregnancies.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_exportPregnancies/export > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-exportPregnancies.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_exportPregnancies_export > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-attrition.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-attrition.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-attrition.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-attrition.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_attrition_by_outcome/export > test-exportPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-exportPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-exportPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-exportPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-exportPregnancies.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_exportPregnancies_custom/export > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-exportPregnancies.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-exportPregnancies.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\Rtmpc37T7t/test_exportPregnancies_export_custom > test-initPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-initPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-initPregnancies.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-initPregnancies.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-initPregnancies.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-initPregnancies.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-initPregnancies.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_preg_final/export > test-outcome_category.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-outcome_category.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-outcome_category.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-outcome_category.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-outcome_category.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-outcome_category.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-outcome_category.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_outcome_category/export > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-outcome_category.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-outcome_category.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-outcome_category.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-outcome_category.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-outcome_category.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-outcome_category.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-outcome_category.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_ga_lb_35_38/export > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runEsd.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runEsd.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runPregnancyIdentifier.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runPregnancyIdentifier.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runPregnancyIdentifier.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runPregnancyIdentifier.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runPregnancyIdentifier.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-runPregnancyIdentifier.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-runPregnancyIdentifier.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_runPregnancyIdentifier/export > test-runPregnancyIdentifier.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runPregnancyIdentifier.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runPregnancyIdentifier.R: ! 6 concept(s) from domain NA eliminated as it is not supported. > test-runPregnancyIdentifier.R: i Supported domains are: device, specimen, measurement, drug, condition, observation, procedure, episode, and visit. > test-runPregnancyIdentifier.R: fix_start_before_end: episodes with start >= end before fix: 0 > test-runPregnancyIdentifier.R: fix_start_before_end: episodes with start >= end after fix: 0 > test-runPregnancyIdentifier.R: Files have been written to: D:\temp\2026_03_07_07_45_17_16671\RtmpeWXiTO/test_runPregnancyIdentifier_custom/export [ FAIL 1 | WARN 0 | SKIP 4 | PASS 259 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-shiny-app.R:9:3' • Sys.getenv("CDM5_POSTGRESQL_DBNAME") == "" is TRUE (1): 'test-db-postgres.R:7:3' • Sys.getenv("CDM5_SQL_SERVER_CDM_DATABASE") == "" is TRUE (1): 'test-db-sqlserver.R:5:3' • Sys.getenv("SNOWFLAKE_SERVER") == "" is TRUE (1): 'test-db-snowflake.R:8:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-db-spark.R:7:3'): runPregnancyIdentifier on SPARK/Databricks ─── Error in `get_connection("spark")`: Could not create connection. Are some environment variables missing? Backtrace: ▆ 1. └─PregnancyIdentifier:::get_connection("spark") at test-db-spark.R:7:3 2. └─rlang::abort("Could not create connection. Are some environment variables missing?") at ./helper-db.R:84:3 [ FAIL 1 | WARN 0 | SKIP 4 | PASS 259 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [232s] OK * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE