* using log directory 'd:/RCompile/CRANincoming/R-devel/PiC.Rcheck' * using R Under development (unstable) (2025-10-09 r88913 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'PiC/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'PiC' version '1.2.6' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [12s] OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'PiC' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s] NOTE .read_xyz_spaces: no visible global function definition for 'head' Calculate_trees_metrics: no visible binding for global variable '.SD' Calculate_trees_metrics: no visible binding for global variable 'z' Calculate_trees_metrics: no visible global function definition for '.' Calculate_trees_metrics: no visible binding for global variable 'x' Calculate_trees_metrics: no visible binding for global variable 'y' Calculate_trees_metrics: no visible global function definition for ':=' Calculate_trees_metrics: no visible binding for global variable 'join_key' Calculate_trees_metrics: no visible binding for global variable '.I' Calculate_trees_metrics: no visible binding for global variable 'X' Calculate_trees_metrics: no visible binding for global variable 'Y' Calculate_trees_metrics: no visible binding for global variable '.BY' Calculate_trees_metrics: no visible binding for global variable 'Height' Calculate_trees_metrics: no visible binding for global variable 'max_z' Calculate_trees_metrics: no visible binding for global variable 'min_z' Calculate_trees_metrics: no visible binding for global variable 'Crown_Base_m' Calculate_trees_metrics: no visible binding for global variable 'Tree_n' Calculate_trees_metrics: no visible binding for global variable 'DBH_cm' Calculate_trees_metrics: no visible global function definition for 'median' Calculate_trees_metrics: no visible global function definition for 'write.csv' SegOne: no visible binding for global variable 'z' SegOne: no visible global function definition for '.' SegOne: no visible binding for global variable 'x' SegOne: no visible global function definition for ':=' SegOne: no visible binding for global variable 'Height_m' SegOne: no visible binding for global variable 'max_z' SegOne: no visible binding for global variable 'min_z' SegOne : compute_dbh_single: no visible binding for global variable 'z' SegOne : compute_dbh_single: no visible global function definition for '.' SegOne : compute_dbh_single: no visible binding for global variable 'x' SegOne: no visible binding for global variable 'DBH_cm' SegOne: no visible binding for global variable 'Z_min' SegOne : calculate_cbh_single: no visible binding for global variable 'x' SegOne : calculate_cbh_single: no visible global function definition for '.' SegOne : calculate_cbh_single: no visible binding for global variable 'z' SegOne: no visible binding for global variable 'Crown_Base_m' SegOne: no visible binding for global variable 'X' SegOne: no visible binding for global variable 'Y' analyze_forest_canopy: no visible global function definition for '.' analyze_forest_canopy: no visible global function definition for 'quantile' analyze_forest_canopy: no visible global function definition for 'weighted.mean' analyze_forest_canopy: no visible global function definition for 'median' analyze_forest_canopy: no visible global function definition for 'sd' calculate_coverage_degree: no visible global function definition for 'quantile' calculate_crown_base_heights : calculate_cbh: no visible binding for global variable 'Tree_n' calculate_crown_base_heights : calculate_cbh: no visible binding for global variable 'x' calculate_crown_base_heights : calculate_cbh: no visible binding for global variable 'y' calculate_dbh : compute_dbh: no visible binding for global variable 'min_z' calculate_dbh : compute_dbh: no visible binding for global variable 'z' calculate_dbh : compute_dbh: no visible global function definition for '.' calculate_dbh : compute_dbh: no visible binding for global variable 'x' calculate_dbh : compute_dbh: no visible binding for global variable 'y' calculate_dbh: no visible global function definition for ':=' calculate_dbh: no visible binding for global variable 'DBH' calculate_dbh: no visible binding for global variable '.BY' filter_trees_by_point_count: no visible binding for global variable '.N' filter_trees_by_point_count: no visible binding for global variable 'Tree_n' filter_trees_by_point_count: no visible binding for global variable 'DBH_cm' filter_trees_by_point_count: no visible global function definition for 'median' filter_trees_by_point_count: no visible binding for global variable 'n_points' segment_wood: no visible binding for global variable '.N' segment_wood: no visible global function definition for '.' segment_wood: no visible binding for global variable 'num' segment_wood: no visible binding for global variable 'x' segment_wood: no visible binding for global variable 'z' separate_foliage: no visible global function definition for '.' separate_foliage: no visible binding for global variable 'x' separate_foliage: no visible binding for global variable 'y' separate_foliage: no visible binding for global variable 'z' separate_foliage: no visible binding for global variable '.N' Undefined global functions or variables: . .BY .I .N .SD := Crown_Base_m DBH DBH_cm Height Height_m Tree_n X Y Z_min head join_key max_z median min_z n_points num quantile sd weighted.mean write.csv x y z Consider adding importFrom("stats", "median", "quantile", "sd", "weighted.mean") importFrom("utils", "head", "write.csv") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking for unstated dependencies in 'tests' ... OK * checking tests ... [340s] OK Running 'testthat.R' [340s] * checking PDF version of manual ... [19s] OK * checking HTML version of manual ... OK * DONE Status: 1 NOTE