* using log directory 'd:/RCompile/CRANincoming/R-devel/PerRegMod.Rcheck'
* using R Under development (unstable) (2024-11-07 r87302 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'PerRegMod/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'PerRegMod' version '4.4.1'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Regui Slimane <slimaneregui111997@gmail.com>'

New submission

Possibly misspelled words in DESCRIPTION:
  PerRegMod (4:8)

The Title field starts with the package name.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'PerRegMod' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Maintainer field differs from that derived from Authors@R
  Maintainer: 'Regui Slimane <slimaneregui111997@gmail.com>'
  Authors@R:  'Slimane Regui <slimaneregui111997@gmail.com>'

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... ERROR
  Running 'test.R'
Running the tests in 'tests/test.R' failed.
Complete output:
  > 
  > #""""""""""""""""""""""""Detecting periodicity
  > install.packages("expm", repos = "https://cran.r-project.org")
  Installing package into 'D:/temp/2024_11_08_21_50_02/Rtmpmi2Xat/RLIBS_2b62c1c375cdf'
  (as 'lib' is unspecified)
  trying URL 'https://cran.r-project.org/bin/windows/contrib/4.5/expm_1.0-0.zip'
  Content type 'application/zip' length 222243 bytes (217 KB)
  ==================================================
  downloaded 217 KB
  
  package 'expm' successfully unpacked and MD5 sums checked
  
  The downloaded binary packages are in
  	D:\temp\2024_11_08_21_50_02\RtmpAHZi0y\downloaded_packages
  > install.packages("sn", repos = "https://cran.r-project.org")
  Installing package into 'D:/temp/2024_11_08_21_50_02/Rtmpmi2Xat/RLIBS_2b62c1c375cdf'
  (as 'lib' is unspecified)
  trying URL 'https://cran.r-project.org/bin/windows/contrib/4.5/sn_2.1.1.zip'
  Content type 'application/zip' length 1844589 bytes (1.8 MB)
  ==================================================
  downloaded 1.8 MB
  
  package 'sn' successfully unpacked and MD5 sums checked
  
  The downloaded binary packages are in
  	D:\temp\2024_11_08_21_50_02\RtmpAHZi0y\downloaded_packages
  > install.packages("readxl", repos = "https://cran.r-project.org")
  Installing package into 'D:/temp/2024_11_08_21_50_02/Rtmpmi2Xat/RLIBS_2b62c1c375cdf'
  (as 'lib' is unspecified)
  trying URL 'https://cran.r-project.org/bin/windows/contrib/4.5/readxl_1.4.3.zip'
  Content type 'application/zip' length 1203719 bytes (1.1 MB)
  ==================================================
  downloaded 1.1 MB
  
  package 'readxl' successfully unpacked and MD5 sums checked
  
  The downloaded binary packages are in
  	D:\temp\2024_11_08_21_50_02\RtmpAHZi0y\downloaded_packages
  > 
  > #install.packages("expm")
  > #install.packages("sn")
  > #install.packages("readxl")
  > 
  > 
  > library(PerRegMod)
  > library(expm)
  Loading required package: Matrix
  
  Attaching package: 'expm'
  
  The following object is masked from 'package:Matrix':
  
      expm
  
  > library(readxl)
  > library(sn)# for skew normal density
  Loading required package: stats4
  
  Attaching package: 'sn'
  
  The following object is masked from 'package:stats':
  
      sd
  
  > 
  > n=200
  > s=2
  > x1=rnorm(n,0,1)
  > x2=rnorm(n,0,2)
  > x3=rnorm(n,0,3)
  > x4=rnorm(n,0,2.7)
  > y=rnorm(n,0,2.5)
  > x=list(x1,x2,x3,x4)
  > model=lm(y~x1+x2+x3+x4)
  > z=model$residuals
  > check_periodicity(x,y,s)
  Chi-squared test for detecting periodicity of coefficients
  
  
  Chi-squared statistic: 14.72439  on df= 6 , p-value:  0.0225121294524752> 
  > ####""""""""""""""""""""""""" LSE method
  > set.seed(4)
  > s=2
  > n=200
  > m=n/s
  > p=3
  > mu=c(2,6)
  > beta1=c(3,5)
  > beta2=c(1,2.5)
  > beta3=c(-2,1)
  > x1=runif(n,0,5)
  > x2=runif(n,0,10)
  > x3=runif(n,0,15)
  > y=rep(0,n)
  > for (i in 1:s) {
  +   q=seq(i,n,s)
  +   y[q]=mu[i] + beta1[i] * x1[q] + beta2[i] * x2[q] + beta3[i] * x3[q] + rnorm(m,0,1)
  + }
  > x=list(x1,x2,x3)
  > lm_per(x,y,s)
  Residuals:
         0%       25%       50%       75%      100% 
  -2.549633 -0.626857  0.024333  0.639637  2.920669 
  
  Coefficients:
       intercept x...1... X...2... X...3...      sd
  s= 1    2.0178   3.0710   1.0052 -2.04169 0.96313
  s= 2    5.7531   5.1528   2.4795  0.98718 0.97588
  
  Root mean square error:  0.9499377> 
  > 
  > ##""""""""""""""""""""""" AE
  > set.seed(4)
  > s=2
  > n=200
  > m=n/s
  > p=3
  > mu=c(2,6)
  > beta1=c(3,5)
  > beta2=c(1,2.5)
  > beta3=c(-2,1)
  > x1=runif(n,0,5)
  > x2=runif(n,0,10)
  > x3=runif(n,0,15)
  > y=rep(0,n)
  > for (i in 1:s) {
  +   q=seq(i,n,s)
  +   y[q]=mu[i] + beta1[i] * x1[q] + beta2[i] * x2[q] + beta3[i] * x3[q] + rsn(m,alpha = 10)
  + }
  > x=list(x1,x2,x3)
  > lm_per_AE(x,y,s)
  Residuals:
        0%      25%      50%      75%     100% 
  -0.47063  0.14000  0.48720  0.92105  2.65079 
  
  Coefficients:
       intercept x...1... X...2... X...3...      SD
  s= 1    2.1250   2.9693  0.98514 -1.96983 0.46734
  s= 2    6.2427   4.9575  2.51490  0.99866 0.38663
  
  Root mean square error:  0.8224663> 
  > ######"""""""""""""""""""""""""" real data examples
  > #####"
  > #Data <- system.file("data", "weather_data_casablanca-settat.xlsx", package = "PerRegMod")
  > #load("~/PerRegMod_4.4.1/PerRegMod/data/weather_data_casablanca_settat.RData")
  > #Data=weather_data_casablanca_settat
  > 
  > #file_path <- system.file("data", "weather_data_casablanca_settat.xlsx", package = "PerRegMod")
  > #Data <- readxl::read_excel(file_path)
  > #file_path <- system.file("inst/extdata", "weather_data_casablanca_settat.xlsx", package = "PerRegMod")
  > #Data <- readxl::read_excel(file_path)
  > Data=read_xlsx("~/PerRegMod_4.4.1/PerRegMod/inst/extdata/weather_data_casablanca_settat.xlsx")
  Error: `path` does not exist: '~/PerRegMod_4.4.1/PerRegMod/inst/extdata/weather_data_casablanca_settat.xlsx'
  Execution halted
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 2 NOTEs