* using log directory ‘/srv/hornik/tmp/CRAN/PaLMr.Rcheck’ * using R Under development (unstable) (2023-10-18 r85349) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 16.0.6 (15) GNU Fortran (Debian 13.2.0-4) 13.2.0 * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘PaLMr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘PaLMr’ version ‘0.1.4’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Li Yuan ’ New submission * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘PaLMr’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) explainCodePALM.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:61: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:67: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:70: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:71: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:77: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:78: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:79: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:80: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:81: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:87: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:88: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:89: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:98: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:99: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:100: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:101: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:107: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:108: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:109: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:110: Lost braces in \itemize; meant \describe ? checkRd: (-1) explainCodePALM.Rd:111: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:65: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:66: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:67: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:75: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:76: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:77: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:78: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:79: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:85: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:86: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:87: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:88: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:89: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:95: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:96: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:98: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:99: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:105: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:106: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:107: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:108: Lost braces in \itemize; meant \describe ? checkRd: (-1) fixGrammarPALM.Rd:109: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:64: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:65: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:66: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:67: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:74: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:75: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:76: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:77: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:78: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:84: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:85: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:86: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:87: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:88: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:94: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:95: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:96: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:98: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:104: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:105: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:106: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:107: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:108: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:114: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:115: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:116: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:117: Lost braces in \itemize; meant \describe ? checkRd: (-1) getReferencePALM.Rd:118: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:48: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:66: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:67: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:68: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:69: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:70: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:76: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:77: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:78: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:79: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:80: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:86: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:87: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:88: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:89: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:96: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:98: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:99: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:100: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:106: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:107: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:108: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:109: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTextPALM.Rd:110: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:50: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:51: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:52: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:61: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:62: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:63: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:64: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:70: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:71: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:72: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:73: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:74: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:80: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:81: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:82: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:83: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:84: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:90: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:91: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:92: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:93: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:94: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:100: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:101: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:102: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:103: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:104: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:110: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:111: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:112: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:113: Lost braces in \itemize; meant \describe ? checkRd: (-1) optimizeCodePALM.Rd:114: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [0s/0s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs