R Under development (unstable) (2025-06-22 r88341 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(PTL.PRS) > > test_check("PTL.PRS") ===================================================================================== Step 0: Generating pseudo summary statistics... Number of individuals: 200 Number of bytes: 50 Number of snps: 202 Generated pseudo summary statistics with 199 SNPs. Generated pseudo summary statistics with 199 SNPs. Generated pseudo summary statistics: Test: 52.95 indivs, Train: 203.445675 indivs, Validation: 43.604325 indivs. Psuedo summary statistics written to files. ===================================================================================== Step 1: Running block-wise gradient descent... Number of individuals: 200 Number of bytes: 50 Number of snps: 202 Receiving block data from R (via queue)... Received 20 blocks from R Gradient descent completed. ===================================================================================== Step 2: Running hyperparameter tuning... Hyperparameter tuning completed. Results have been successfully written with the prefix: Output_test [ FAIL 0 | WARN 0 | SKIP 1 | PASS 0 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • empty test (1): 'test.PTL_PRS_train.R:1:1' [ FAIL 0 | WARN 0 | SKIP 1 | PASS 0 ] > > proc.time() user system elapsed 1.31 0.25 1.71