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Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(PKbioanalysis) > > test_check("PKbioanalysis") 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.423393 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.566288 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.630304 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.77266 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.850037 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:12.946035 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.03829 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.142688 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.182867 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.222258 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.257952 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.437189 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.474981 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.537949 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.575003 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: H Last Fill: H,4 Remaining Empty Spots: 8 Description: Last Modified: 2024-09-10 00:26:13.645591 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.71311 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.77595 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.837318 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.903259 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:13.964628 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.000302 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.156908 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.311772 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.46505 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.619378 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.771293 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:14.922716 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.074079 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() Plate not registered. To register, use register_plate() Plate not registered. To register, use register_plate() Plate not registered. To register, use register_plate() Plate not registered. To register, use register_plate() 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.313123 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.464258 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.621466 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.764186 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:15.910908 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:16.057796 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:16.20673 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:16.352587 Plate ID: 1_1 Registered: FALSE 96 Well Plate Active Rows: A B C D E F G H Last Fill: A,1 Remaining Empty Spots: 96 Description: Last Modified: 2024-09-10 00:26:16.44991 Plate ID: 1_1 Registered: FALSE Plate not registered. To register, use register_plate() [ FAIL 6 | WARN 11 | SKIP 0 | PASS 37 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-injec_list.R:10:3'): save_injecseq_csv ───────────────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(...) at test-injec_list.R:10:3 2. └─PKbioanalysis:::register_plate.PlateObj(...) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) ── Error ('test-injec_list.R:29:3'): multiple_plates ─────────────────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(...) at test-injec_list.R:29:3 2. └─PKbioanalysis:::register_plate.PlateObj(...) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) ── Error ('test-injec_list.R:47:3'): exploratory_samples_added ───────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(...) at test-injec_list.R:47:3 2. └─PKbioanalysis:::register_plate.PlateObj(...) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) ── Error ('test-injec_list.R:63:3'): writing_increment_id ────────────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(...) at test-injec_list.R:63:3 2. └─PKbioanalysis:::register_plate.PlateObj(...) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) ── Error ('test-plate.R:13:3'): plate_registration ───────────────────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(x) at test-plate.R:13:3 2. └─PKbioanalysis:::register_plate.PlateObj(x) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) ── Error ('test-plate.R:22:3'): reuse_plate ──────────────────────────────────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. ├─PKbioanalysis::register_plate(...) at test-plate.R:22:3 2. └─PKbioanalysis:::register_plate.PlateObj(...) 3. └─PKbioanalysis:::.register_plate_logic(plate) 4. └─base::saveRDS(plate, save_path) 5. └─base::gzfile(file, mode) [ FAIL 6 | WARN 11 | SKIP 0 | PASS 37 ] Error: Test failures Execution halted