* using log directory ‘/srv/hornik/tmp/CRAN_pretest/OpenMx.Rcheck’
* using R Under development (unstable) (2024-10-17 r87242)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘OpenMx/DESCRIPTION’ ... OK
* this is package ‘OpenMx’ version ‘2.21.13’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [8s/11s] NOTE
Maintainer: ‘Robert M. Kirkpatrick <robert.kirkpatrick@vcuhealth.org>’

New maintainer:
  Robert M. Kirkpatrick <robert.kirkpatrick@vcuhealth.org>
Old maintainer(s):
  Joshua N. Pritikin <jpritikin@pobox.com>

Found the following (possibly) invalid URLs:
  URL: http://openmx.ssri.psu.edu
    From: DESCRIPTION
          DESCRIPTION
          man/OpenMx.Rd
          inst/CITATION
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
  URL: http://openmx.ssri.psu.edu/forums
    From: DESCRIPTION
          man/OpenMx.Rd
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
  URL: https://openmx.ssri.psu.edu/documentation
    From: man/MxExpectationGREML-class.Rd
          man/MxFitFunctionGREML-class.Rd
          man/MxMatrix-class.Rd
          man/OpenMx.Rd
          man/mxRestore.Rd
          man/mxRun.Rd
          man/mxSave.Rd
          man/omxSelectRowsAndCols.Rd
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
  URL: https://openmx.ssri.psu.edu/documentation/
    From: man/MxAlgebra-class.Rd
          man/MxBounds-class.Rd
          man/MxCI-class.Rd
          man/MxConstraint-class.Rd
          man/MxData-class.Rd
          man/MxModel-class.Rd
          man/demoOneFactor_data.Rd
          man/demoTwoFactor_data.Rd
          man/example1_data.Rd
          man/factorExample1_data.Rd
          man/factorScaleExample1_data.Rd
          man/factorScaleExample2_data.Rd
          man/jointdata_data.Rd
          man/latentMultipleRegExample1_data.Rd
          man/latentMultipleRegExample2_data.Rd
          man/lazarsfeld_data.Rd
          man/multiData1_data.Rd
          man/mxAlgebra.Rd
          man/mxAlgebraObjective.Rd
          man/mxBootstrapEval.Rd
          man/mxBounds.Rd
          man/mxCI.Rd
          man/mxConstraint.Rd
          man/mxData.Rd
          man/mxDataWLS.Rd
          man/mxEval.Rd
          man/mxExpectationGREML.Rd
          man/mxExpectationLISREL.Rd
          man/mxExpectationNormal.Rd
          man/mxExpectationRAM.Rd
          man/mxExpectationStateSpace.Rd
          man/mxExpectationStateSpaceContinuousTime.Rd
          man/mxFIMLObjective.Rd
          man/mxFactor.Rd
          man/mxFactorScores.Rd
          man/mxFitFunctionAlgebra.Rd
          man/mxFitFunctionGREML.Rd
          man/mxFitFunctionML.Rd
          man/mxFitFunctionR.Rd
          man/mxFitFunctionRow.Rd
          man/mxFitFunctionWLS.Rd
          man/mxGREMLDataHandler.Rd
          man/mxGenerateData.Rd
          man/mxGetExpected.Rd
          man/mxKalmanScores.Rd
          man/mxLISRELObjective.Rd
          man/mxMI.Rd
          man/mxMLObjective.Rd
          man/mxMatrix.Rd
          man/mxModel.Rd
          man/mxOption.Rd
          man/mxPath.Rd
          man/mxRAMObjective.Rd
          man/mxRObjective.Rd
          man/mxRename.Rd
          man/mxRowObjective.Rd
          man/mxThreshold.Rd
          man/mxVersion.Rd
          man/myAutoregressiveData_data.Rd
          man/myGrowthKnownClassData_data.Rd
          man/myGrowthMixtureData_data.Rd
          man/myLongitudinalData_data.Rd
          man/myRegDataRaw_data.Rd
          man/myRegData_data.Rd
          man/myTwinData_data.Rd
          man/nuclear_twin_design_data.Rd
          man/omxBrownie.Rd
          man/omxCheckEquals.Rd
          man/omxCheckIdentical.Rd
          man/omxCheckSetEquals.Rd
          man/omxCheckTrue.Rd
          man/omxCheckWithinPercentError.Rd
          man/omxGraphviz.Rd
          man/omxSaturatedModel.Rd
          man/summary.MxModel.Rd
          man/twin_NA_dot_data.Rd
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
  URL: https://openmx.ssri.psu.edu/forums
    From: README.md
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
  URL: https://openmx.ssri.psu.edu/thread/144
    From: man/Oscillator_data.Rd
    Status: Error
    Message: server verification failed: certificate signer not trusted. (CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘OpenMx’ can be installed ... [551s/550s] OK
* used C compiler: ‘Debian clang version 18.1.8 (12)’
* used Fortran compiler: ‘Debian flang-new version 18.1.8 (12)’
* used C++ compiler: ‘Debian clang version 18.1.8 (12)’
* checking C++ specification ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking whether startup messages can be suppressed ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [41s/41s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [35s/35s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [31s/31s] OK
  Running ‘testthat.R’ [31s/31s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [4s/4s] OK
* checking PDF version of manual ... [9s/9s] OK
* checking HTML version of manual ... [7s/7s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE