R Under development (unstable) (2025-02-27 r87839 ucrt) -- "Unsuffered Consequences"
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> library(testthat)
> library(OncoBayes2)
Loading required package: RBesT
This is RBesT version 1.8.1 (released 2025-01-20, git-sha 5048c0b)
This is OncoBayes2 version 0.9.0 (released 2025-03-01, git-sha 3ab43d5)
> 
> test_check("OncoBayes2")
Loading required package: StanHeaders

rstan version 2.32.6 (Stan version 2.32.2)

For execution on a local, multicore CPU with excess RAM we recommend calling
options(mc.cores = parallel::detectCores()).
To avoid recompilation of unchanged Stan programs, we recommend calling
rstan_options(auto_write = TRUE)
For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions,
change `threads_per_chain` option:
rstan_options(threads_per_chain = 1)

Do not specify '-march=native' in 'LOCAL_CPPFLAGS' or a Makevars file
Tests running with fake sampling

Attaching package: 'tibble'

The following object is masked from 'package:assertthat':

    has_name


Attaching package: 'tidyr'

The following object is masked from 'package:rstan':

    extract

The following object is masked from 'package:testthat':

    matches


Attaching package: 'dplyr'

The following object is masked from 'package:testthat':

    matches

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Tests running with fake sampling
No stratum defined - assigning all groups to single stratum "all"
No stratum defined - assigning all groups to single stratum "all"
No stratum defined - assigning all groups to single stratum "all"
Error : 'control' list contains unknown members of names: aBapt_delta.
In addition: There were 12 warnings (use warnings() to see them)
Error in na.fail.default(X[[i]], ...) : missing values in object
[ FAIL 0 | WARN 54 | SKIP 33 | PASS 383 ]

══ Skipped tests (33) ══════════════════════════════════════════════════════════
• On CRAN (33): 'test-blrm_exnex.R:67:1', 'test-blrm_exnex.R:72:1',
  'test-blrm_exnex.R:77:1', 'test-blrm_exnex.R:83:3', 'test-blrm_exnex.R:91:3',
  'test-blrm_exnex.R:99:3', 'test-blrm_exnex.R:107:3',
  'test-blrm_exnex.R:151:3', 'test-blrm_exnex.R:1156:5',
  'test-blrm_exnex.R:1342:5', 'test-blrm_exnex.R:1480:3',
  'test-blrm_exnex.R:1693:3', 'test-blrm_exnex.R:2020:3',
  'test-critical_quantile.R:14:3', 'test-critical_quantile.R:64:3',
  'test-critical_quantile.R:118:3', 'test-critical_quantile.R:142:3',
  'test-plot_toxicity_curve.R:166:3', 'test-plot_toxicity_curve.R:185:3',
  'test-plot_toxicity_curve.R:237:5', 'test-plot_toxicity_curve.R:237:5',
  'test-plot_toxicity_curve.R:237:5', 'test-plot_toxicity_intervals.R:110:3',
  'test-plot_toxicity_intervals.R:136:3',
  'test-plot_toxicity_intervals.R:159:5',
  'test-plot_toxicity_intervals.R:159:5',
  'test-plot_toxicity_intervals.R:159:5',
  'test-plot_toxicity_intervals_stacked.R:158:3',
  'test-plot_toxicity_intervals_stacked.R:232:3',
  'test-plot_toxicity_intervals_stacked.R:293:5',
  'test-plot_toxicity_intervals_stacked.R:293:5',
  'test-plot_toxicity_intervals_stacked.R:293:5',
  'test-plot_toxicity_intervals_stacked.R:343:5'

[ FAIL 0 | WARN 54 | SKIP 33 | PASS 383 ]
> 
> proc.time()
   user  system elapsed 
  58.48    1.14   59.62