* using log directory 'd:/RCompile/CRANincoming/R-devel/OmopSketch.Rcheck'
* using R Under development (unstable) (2026-01-29 r89354 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'OmopSketch/DESCRIPTION' ... OK
* this is package 'OmopSketch' version '1.0.1'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [13s] NOTE
Maintainer: 'Cecilia Campanile <cecilia.campanile@ndorms.ox.ac.uk>'

Found the following (possibly) invalid URLs:
  URL: https://dpa-pde-oxford.shinyapps.io/OmopSketchCharacterisation/
    From: inst/doc/database_characteristics.html
          README.md
    Status: 500
    Message: Internal Server Error
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'OmopSketch' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [138s] OK
  Running 'testthat.R' [138s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [293s] ERROR
Error(s) in re-building vignettes:
--- re-building 'database_characteristics.Rmd' using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB

--- finished re-building 'database_characteristics.Rmd'

--- re-building 'missing_data.Rmd' using rmarkdown
--- finished re-building 'missing_data.Rmd'

--- re-building 'summarise_clinical_tables_records.Rmd' using rmarkdown
--- finished re-building 'summarise_clinical_tables_records.Rmd'

--- re-building 'summarise_concept_id_counts.Rmd' using rmarkdown
--- finished re-building 'summarise_concept_id_counts.Rmd'

--- re-building 'summarise_observation_period.Rmd' using rmarkdown

Quitting from summarise_observation_period.Rmd:160-168 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
    ▆
 1. └─OmopSketch::plotObservationPeriod(...)
 2.   └─visOmopResults::barPlot(...)
 3.     └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
 4.       └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'summarise_observation_period.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_observation_period.Rmd'

--- re-building 'summarise_person.Rmd' using rmarkdown
--- finished re-building 'summarise_person.Rmd'

--- re-building 'summarise_trend.Rmd' using rmarkdown

Quitting from summarise_trend.Rmd:262-277 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
    ▆
 1. └─OmopSketch::plotTrend(result = result, colour = "sex", facet = "age_group")
 2.   └─visOmopResults::scatterPlot(...)
 3.     └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
 4.       └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'summarise_trend.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_trend.Rmd'

SUMMARY: processing the following files failed:
  'summarise_observation_period.Rmd' 'summarise_trend.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 1 NOTE