Package check result: ERROR Check: examples, Result: NOTE Examples with CPU (user + system) or elapsed time > 5s user system elapsed mockOmopSketch 5.675 0.312 5.958 tableOmopSnapshot 5.409 0.079 5.365 Check: re-building of vignette outputs, Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘A-summarise_clinical_tables_records.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_special_noSuggests/OmopSketch.Rcheck/vign_test/OmopSketch/vignettes/A-summarise_clinical_tables_records_files/figure-html/unnamed-chunk-9-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 81237 bytes Input file size = 81423 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 79282 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 79282 Output IDAT size = 79282 bytes (1955 bytes decrease) Output file size = 79360 bytes (2063 bytes = 2.53% decrease) ** Processing: /home/hornik/tmp/CRAN_special_noSuggests/OmopSketch.Rcheck/vign_test/OmopSketch/vignettes/A-summarise_clinical_tables_records_files/figure-html/unnamed-chunk-10-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 77812 bytes Input file size = 77998 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 77054 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 75968 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 75968 Output IDAT size = 75968 bytes (1844 bytes decrease) Output file size = 76046 bytes (1952 bytes = 2.50% decrease) ** Processing: /home/hornik/tmp/CRAN_special_noSuggests/OmopSketch.Rcheck/vign_test/OmopSketch/vignettes/A-summarise_clinical_tables_records_files/figure-html/unnamed-chunk-11-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 224445 bytes Input file size = 224847 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 181618 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 181618 Output IDAT size = 181618 bytes (42827 bytes decrease) Output file size = 181696 bytes (43151 bytes = 19.19% decrease) ** Processing: /home/hornik/tmp/CRAN_special_noSuggests/OmopSketch.Rcheck/vign_test/OmopSketch/vignettes/A-summarise_clinical_tables_records_files/figure-html/unnamed-chunk-13-1.png 1344x960 pixels, 3x8 bits/pixel, RGB Input IDAT size = 199603 bytes Input file size = 199969 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 193889 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 193889 Output IDAT size = 193889 bytes (5714 bytes decrease) Output file size = 193967 bytes (6002 bytes = 3.00% decrease) --- finished re-building ‘A-summarise_clinical_tables_records.Rmd’ --- re-building ‘B-summarise_concept_counts.Rmd’ using rmarkdown trying URL 'https://example-data.ohdsi.dev/GiBleed.zip' Content type 'application/zip' length 6754786 bytes (6.4 MB) ================================================== downloaded 6.4 MB Quitting from lines 37-51 [unnamed-chunk-2] (B-summarise_concept_counts.Rmd) Error: processing vignette 'B-summarise_concept_counts.Rmd' failed with diagnostics: there is no package called 'CodelistGenerator' --- failed re-building ‘B-summarise_concept_counts.Rmd’ --- re-building ‘C-summarise_pop_characteristics.Rmd’ using rmarkdown trying URL 'https://example-data.ohdsi.dev/GiBleed.zip' Content type 'application/zip' length 6754786 bytes (6.4 MB) ================================================== downloaded 6.4 MB --- finished re-building ‘C-summarise_pop_characteristics.Rmd’ SUMMARY: processing the following file failed: ‘B-summarise_concept_counts.Rmd’ Error: Vignette re-building failed. Execution halted