test_that("Testing transformations of data", { taxa <- metagenomics$new( biomData = "input/metagenomics/biom_with_taxonomy_hdf5.biom", metaData = "input/metagenomics/metadata.tsv", treeData = "input/metagenomics/rooted_tree.newick" ) # Perform log transformation taxa$transform(log2) expect_snapshot(taxa) # In between reset taxa$reset() # Perform sqrt transformation taxa$transform(sqrt) expect_snapshot(taxa) })