* using log directory ‘/srv/hornik/tmp/CRAN/OPI.Rcheck’ * using R Under development (unstable) (2024-07-01 r86857) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (1) Debian flang-new version 18.1.8 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘OPI/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘OPI’ version ‘3.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘Andrew Turpin ’ Possibly misspelled words in DESCRIPTION: ImoVifa (14:460) Topcon (14:469) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘OPI’ can be installed ... [3s/3s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s/5s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) KTPsi.Rd:103: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:104-106: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:107-108: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:109-110: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:111-112: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:120: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:121-123: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:124-126: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:127-128: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:129-130: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:131: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:132: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:133: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:134: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:135-137: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:138: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:142: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) KTPsi.Rd:143: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) MOCS.Rd:62: Lost braces; missing escapes or markup? 62 | list(err={NULL|msg}, seen={TRUE|FALSE}, time = response time (in ms)). The parameters passed to | ^ checkRd: (-1) MOCS.Rd:62: Lost braces; missing escapes or markup? 62 | list(err={NULL|msg}, seen={TRUE|FALSE}, time = response time (in ms)). The parameters passed to | ^ checkRd: (-1) QUESTP.Rd:119: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:120-124: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:125-126: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:127: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:128-129: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:137: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:138-141: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:142: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:143: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:144: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:145: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:146-147: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:148-149: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:150-152: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:153: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:157: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) QUESTP.Rd:158: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:43-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:50-52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fourTwo.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:55-57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:62-63: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:64-65: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:71-72: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:73-74: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:80: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:93: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:94-95: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:96-97: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) full_threshold.Rd:98-99: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) opiSetup.Rd:10: Lost braces; missing escapes or markup? 10 | \item{settings}{A list containing the same names as that returned by {@link opi_queryDevice}.} | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING Undocumented code objects: ‘.opi_env’ All user-level objects in a package should have documentation entries. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [14s/14s] NOTE Examples with CPU (user + system) or elapsed time > 5s user system elapsed KTPsi 10.879 0.035 10.915 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [1s/1s] OK Running ‘testthat.R’ [1s/1s] * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [2s/2s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 3 NOTEs