R Under development (unstable) (2025-06-17 r88325 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat); > library(NanoStringNorm); > > test_check('NanoStringNorm'); There were 25 samples imported. Note that spaces in sample names will be replaced by dots. The first and last 3 sample names found in the dataset are: X20100728_Watson1-1_HW1D-a_01 X20100728_Watson1-1_HW2B-b_02 X20100728_Watson1-1_HW3B-a_03 X20100728_Watson1-3_HW4D12-B_12 X20100728_Watson1-2_WW44-a_02 X20100728_Watson1-2_WW43-b_01 There were 68 genes imported with the following Code Class breakdown: Endogenous Negative Positive 54 8 6 There were 25 samples imported. Note that spaces in sample names will be replaced by dots. The first and last 3 sample names found in the dataset are: X20100728_Watson1-1_HW1D-a_01 X20100728_Watson1-1_HW2B-b_02 X20100728_Watson1-1_HW3B-a_03 X20100728_Watson1-3_HW4D12-B_12 X20100728_Watson1-2_WW44-a_02 X20100728_Watson1-2_WW43-b_01 There were 68 genes imported with the following Code Class breakdown: Endogenous Negative Positive 54 8 6 Genes requiring probe level correction: [1] "hsa-let-7a (+++ See Message Below)" "hsa-let-7c (+++ See Message Below)" You are removing the following probes from all further analysis: [1] "hsa-let-7a (+++ See Message Below)" "hsa-let-7c (+++ See Message Below)" [ FAIL 0 | WARN 0 | SKIP 0 | PASS 40 ] > > proc.time() user system elapsed 1.73 0.21 1.96