R Under development (unstable) (2023-07-05 r84643 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(NMdata) NMdata 0.1.0. Browse NMdata documentation at https://philipdelff.github.io/NMdata/ > > test_check("NMdata") column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid MDV Column not found 1 0 AMT Non-zero dose for obs or sim record 2 2 TIME Negative time 2 2 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 TIME Not numeric 1 1 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 NAME Non-unique column names 1 0 column check N Nid EVID Column not found 1 0 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 19 19 MDV MDV does not match DV 755 131 column check N Nid EVID Subject has no obs 19 19 II Column not found 1 0 MDV Column not found 1 0 column check N Nid ADDL Column not found 1 0 EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 ID Leading zero may corrupt merging 905 150 ROW Leading zero may corrupt merging 1502 150 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 WEIGHTB Cov not unique within ID 1 1 trtact Not numeric 905 150 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 PERIOD, FED Cov not unique within ID-occ 1 1 REE Column not found 1 0 PERIOD is NA 808 140 ID ID disjoint 10 10 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 site Not numeric 150 150 ASSAY NA expected 1 1 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 DV Not numeric 150 150 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 18 18 MDV Column not found 1 0 ID ID disjoint 1 1 column check N Nid EVID Subject has no obs 19 19 ID Subject ID not unique within unique subject IDs 2 2 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid EVID Subject has no obs 19 19 MDV Column not found 1 0 column check N Nid ID, CMT, EVID, TIME Duplicated event 2 1 column check N Nid DV Column not found 1 0 EVID Subject has no obs 1 1 MDV Column not found 1 0 ROW Column not found 1 0 column check N Nid No rows in data 1 0 source name nrow ncol nid filetype file.mtime file.logtime 1 input xgxr1.csv 1502 24 150 csv 2023-07-06 13:33:40 NA file has.col.row has.col.id 1 testData/nonmem/../data/xgxr1.csv TRUE TRUE datafile INPUT nonmem result compare 1 ROW ROW ROW ROW OK 2 ID ID ID ID OK 3 NOMTIME NOMTIME NOMTIME NOMTIME OK 4 TIME TIME TIME TIME OK 5 EVID EVID EVID EVID OK 6 CMT CMT CMT CMT OK 7 AMT AMT AMT AMT OK 8 DV DV DV DV OK 9 FLAG FLAG FLAG FLAG OK 10 STUDY STUDY STUDY STUDY OK 11 BLQ BLQ BLQ BLQ OK 12 CYCLE CYCLE CYCLE CYCLE OK 13 DOSE DOSE DOSE DOSE OK 14 PART PART PART PART OK 15 PROFDAY PROFDAY PROFDAY PROFDAY OK 16 PROFTIME PROFTIME PROFTIME PROFTIME OK 17 WEIGHTB WEIGHTB WEIGHTB WEIGHTB OK 18 eff0 eff0 eff0 eff0 OK 19 EVENTU 20 NAME 21 TIMEUNIT 22 TRTACT 23 flag 24 trtact column check N Nid 1: EVID Subject has no obs 19 19 2: MDV Column not found 1 0 source name nrow ncol nid filetype file.mtime file.logtime 1 input xgxr1.csv 1502 24 150 csv 2023-07-06 13:33:40 NA file has.col.row has.col.id 1 testData/nonmem/../data/xgxr1.csv TRUE TRUE datafile INPUT nonmem result compare 1 ROW ROW ROW ROW OK 2 ID ID ID ID OK 3 NOMTIME NOMTIME NOMTIME NOMTIME OK 4 TIME TIME TIME TIME OK 5 EVID EVID EVID EVID OK 6 CMT CMT CMT CMT OK 7 AMT AMT AMT AMT OK 8 DV DV DV DV OK 9 FLAG FLAG FLAG FLAG OK 10 STUDY STUDY STUDY STUDY OK 11 BLQ BLQ BLQ BLQ OK 12 CYCLE CYCLE CYCLE CYCLE OK 13 DOSE DOSE DOSE DOSE OK 14 PART PART PART PART OK 15 PROFDAY PROFDAY PROFDAY PROFDAY OK 16 PROFTIME PROFTIME PROFTIME PROFTIME OK 17 WEIGHTB WEIGHTB WEIGHTB WEIGHTB OK 18 eff0 eff0 eff0 eff0 OK 19 EVENTU 20 NAME 21 TIMEUNIT 22 TRTACT 23 flag 24 trtact column check N Nid 1: EVID Subject has no obs 19 19 2: MDV Column not found 1 0 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr003 Used tables, contents shown as used/total: file rows columns IDs xgxr003_res.txt 905/905 7/7 150/150 xgxr003_res_vols.txt 905/905 3/7 150/150 xgxr003_res_fo.txt 150/150 1/2 150/150 xgxr1.csv (input) 905/1502 21/24 150/150 (result) 905 32+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr004 Used tables, contents shown as used/total: file rows columns IDs xgxr004_res.txt 731/731 10/10 90/90 xgxr1.csv (input) 731/1502 23/24 90/90 (result) 731 33+2 90 Distribution of rows on event types in returned data: EVID CMT output result 0 2 641 641 1 1 90 90 All All 731 731 Model: xgxr006 Used tables, contents shown as used/total: file rows columns IDs xgxr006_res.txt 893/893 10/10 142/142 xgxr1_flag0.csv (input) 893/905 23/24 142/142 (result) 893 33+1 142 Distribution of rows on event types in returned data: EVID CMT output result 0 2 751 751 1 1 142 142 All All 893 893 Model: xgxr007 Used tables, contents shown as used/total: file rows columns IDs xgxr007_res.txt 893/893 10/10 142/142 xgxr1_flag0.csv (input) 893/905 23/24 142/142 (result) 893 33+1 142 Distribution of rows on event types in returned data: EVID CMT output result 0 2 751 751 1 1 142 142 All All 893 893 Model: xgxr006 Used tables, contents shown as used/total: file rows columns IDs xgxr006_res.txt 893/893 10/10 142/142 xgxr1_flag0.csv (input) 893/905 23/24 142/142 (result) 893 33+1 142 Distribution of rows on event types in returned data: EVID CMT output result 0 2 751 751 1 1 142 142 All All 893 893 Model: xgxr008 Used tables, contents shown as used/total: file rows columns IDs xgxr008_res.txt 893/893 11/11 142/142 xgxr1_flag0.csv (input) 893/905 22/24 142/142 (result) 893 33+1 142 Distribution of rows on event types in returned data: EVID CMT output result 0 2 751 751 1 1 142 142 All All 893 893 Model: xgxr011 Used tables, contents shown as used/total: file rows columns IDs xgxr011_fo1.txt NA/150 5/7 0/0 xgxr2.rds (input) 1502/1502 24/24 0/0 (result) 1502 29+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT input-only result 0 1 2 2 0 2 1350 1350 1 1 150 150 All All 1502 1502 Model: xgxr013 Used tables, contents shown as used/total: file rows columns IDs xgxr013_res1.txt 731/731 6/6 90/90 xgxr2_flag0.rds (input) 731/905 23/24 90/90 (result) 731 29+2 90 Distribution of rows on event types in returned data: EVID CMT output result 0 2 641 641 1 1 90 90 All All 731 731 Model: xgxr013 Used tables, contents shown as used/total: file rows columns IDs xgxr013_res1.txt 731/731 6/6 NA/NA (result) 731 6+2 NA Input data not used. Model: xgxr013 Used tables, contents shown as used/total: file rows columns IDs xgxr013_res1.txt 731/731 6/6 NA/NA (result) 731 6+2 NA Input data not used. Model: xgxr013 Used tables, contents shown as used/total: file rows columns IDs xgxr013_res1.txt 731/731 6/6 90/90 xgxr2_flag0.rds (input) 731/905 23/24 90/90 (result) 731 29+2 90 Distribution of rows on event types in returned data: EVID CMT output result 0 2 641 641 1 1 90 90 All All 731 731 Model: xgxr011 Used tables, contents shown as used/total: file rows columns IDs xgxr011_fo1.txt NA/150 5/7 0/0 xgxr2.rds (input) 1502/1502 24/24 0/0 (result) 1502 29+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT input-only result 0 1 2 2 0 2 1350 1350 1 1 150 150 All All 1502 1502 Model: xgxr004 Used tables, contents shown as used/total: file rows columns IDs xgxr004_res.txt 731/731 10/10 90/90 xgxr1.csv (input) 1502/1502 23/24 90/90 (result) 1502 33+2 150 Distribution of rows on event types in returned data: EVID CMT input-only output result 0 1 2 0 2 0 2 709 641 1350 1 1 60 90 150 All All 771 731 1502 Model: xgxr004 Used tables, contents shown as used/total: file rows columns IDs xgxr004_res.txt 731/731 10/10 90/90 xgxr1.csv (input) 1502/1502 23/24 90/90 (result) 1502 33+2 150 Distribution of rows on event types in returned data: EVID CMT input-only output result 0 1 2 0 2 0 2 709 641 1350 1 1 60 90 150 All All 771 731 1502 Model: xgxr004 Used tables, contents shown as used/total: file rows columns IDs xgxr004_res.txt 731/731 10/10 90/90 xgxr1.csv (input) 1502/1502 23/24 90/90 (result) 1502 33+2 150 Distribution of rows on event types in returned data: EVID CMT input-only output result 0 1 2 0 2 0 2 709 641 1350 1 1 60 90 150 All All 771 731 1502 Model: xgxr001dir Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001dir Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001dir Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr015 Used tables, contents shown as used/total: file rows columns IDs xgxr015_res.txt 905/905 16/16 150/150 xgxr3.rds (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr004 Used tables, contents shown as used/total: file rows columns IDs xgxr004_res.txt 731/731 10/10 90/90 xgxr1.csv (input) 1502/1502 23/24 90/90 (result) 1502 33+2 150 Distribution of rows on event types in returned data: EVID CMT input-only output result 0 1 2 0 2 0 2 709 641 1350 1 1 60 90 150 All All 771 731 1502 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 NA/NA (result) 905 16+2 NA Input data not used. Model: xgxr010 Used tables, contents shown as used/total: file rows columns IDs xgxr010_res.txt 300/300 10/10 30/30 xgxr1.csv (input) 300/1502 23/24 30/30 (result) 300 33+2 30 Distribution of rows on event types in returned data: EVID CMT output result 0 2 270 270 1 1 30 30 All All 300 300 Model: xgxr019 Used tables, contents shown as used/total: file rows columns IDs xgxr019_res.txt 905/905 7/7 150/150 xgxr019_res_vols.txt 905/905 3/7 150/150 xgxr019_res_vols2.txt 905/905 0/6 150/150 xgxr019_res_fo.txt 150/150 1/2 150/150 xgxr1.csv (input) 905/1502 21/24 150/150 (result) 905 32+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: estim_debug Used tables, contents shown as used/total: file rows columns IDs simvpcdata_debug.csv 98/98 15/15 50/50 input_data_debug.csv (input) 98/100 1/12 50/50 (result) 98 16+2 50 Distribution of rows on event types in returned data: EVID CMT output result 0 48 48 2 50 50 All All 98 98 Model: xgxr022 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 23/25 150/150 (result) 905 39+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr023 Used tables, contents shown as used/total: file rows columns IDs xgxr023_res_fo.txt NA/150 1/2 0/0 xgxr1.csv (input) 905/1502 24/24 0/0 (result) 905 25+2 150 Distribution of rows on event types in returned data: EVID CMT input-only result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr025 Used tables, contents shown as used/total: file rows columns IDs xgxr025a_res.txt 150/150 3/8 150/150 xgxr025b_res.txt 150/150 2/8 150/150 xgxr025c_res.txt 905/905 7/7 150/150 xgxr1.csv (input) 905/1502 21/24 150/150 (result) 905 33+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr025 Used tables, contents shown as used/total: file rows columns IDs xgxr025a_res.txt 150/150 3/8 150/150 xgxr025b_res.txt 150/150 2/9 150/150 xgxr025c_res.txt 905/905 8/8 150/150 xgxr1.csv (input) 905/1502 21/24 150/150 (result) 905 34+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr026 Used tables, contents shown as used/total: file rows columns IDs xgxr026.txt 905/905 8/8 150/150 xgxr5.csv (input) 905/1502 21/24 150/150 (result) 905 29+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr026 Used tables, contents shown as used/total: file rows columns IDs xgxr026.txt 905/905 8/8 150/150 xgxr5.rds (input) 905/1502 21/24 150/150 (result) 905 29+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 NA/NA (result) 905 16+2 NA Input data not used. Model: xgxr014_testsim1 Used tables, contents shown as used/total: file rows columns IDs xgxr014_testsim1.tab 5000/5000 13/13 2/2 NMsimData_xgxr014_testsim1.rds (input) 50/50 7/9 2/2 (result) 5000 20+2 2 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 1 1 200 200 2 2 4800 4800 All All 5000 5000 Model: xgxr014 Used tables, contents shown as used/total: file rows columns IDs xgxr014_res.txt 905/905 12/12 150/150 xgxr2.csv (input) 905/1502 22/24 150/150 (result) 905 34+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr014 Used tables, contents shown as used/total: file rows columns IDs xgxr014_res.txt 905/905 12/12 150/150 xgxr2.rds (input) 905/1502 22/24 150/150 (result) 905 34+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr014 Used tables, contents shown as used/total: file rows columns IDs xgxr014_res.txt 905/905 12/12 150/150 xgxr2.fst (input) 905/1502 22/24 150/150 (result) 905 34+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr001 Used tables, contents shown as used/total: file rows columns IDs xgxr001_res.txt 905/905 16/16 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 38+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr002 Used tables, contents shown as used/total: file rows columns IDs xgxr002_res.txt 905/905 10/10 150/150 xgxr1.csv (input) 905/1502 22/24 150/150 (result) 905 32+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr003 Used tables, contents shown as used/total: file rows columns IDs xgxr003_res.txt 905/905 7/7 150/150 xgxr003_res_vols.txt 905/905 3/7 150/150 xgxr003_res_fo.txt 150/150 1/2 150/150 xgxr1.csv (input) 905/1502 21/24 150/150 (result) 905 32+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr014 Used tables, contents shown as used/total: file rows columns IDs xgxr014_res.txt 905/905 12/12 150/150 xgxr2.rds (input) 905/1502 22/24 150/150 (result) 905 34+2 150 Input and output data merged by: ROW Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Model: xgxr018 Used tables, contents shown as used/total: file rows columns IDs xgxr018_res.txt 905/905 6/6 150/150 xgxr018_res_vols.txt 905/905 3/7 150/150 xgxr018_res_fo.txt 150/150 1/2 150/150 xgxr4.rds (input) 905/1502 21/23 150/150 (result) 905 31+2 150 Distribution of rows on event types in returned data: EVID CMT output result 0 2 755 755 1 1 150 150 All All 905 905 Overview of model scanning results: lst 1: D:/RCompile/CRANincoming/R-devel/lib/NMdata/examples/nonmem/xgxr001.lst 2: D:/RCompile/CRANincoming/R-devel/lib/NMdata/examples/nonmem/xgxr002.lst 3: D:/RCompile/CRANincoming/R-devel/lib/NMdata/examples/nonmem/xgxr003.lst 4: D:/RCompile/CRANincoming/R-devel/lib/NMdata/examples/nonmem/xgxr014.lst 5: D:/RCompile/CRANincoming/R-devel/lib/NMdata/examples/nonmem/xgxr018.lst nrows ncols success warning 1: 905 40 TRUE FALSE 2: 905 34 TRUE FALSE 3: 905 34 TRUE FALSE 4: 905 36 TRUE FALSE 5: 905 33 TRUE FALSE Error in (function (data, drop, col.flagn = "FLAG", rename, copy, file, : drop cannot contain empty strings and NA's. data nrows ncols 1: pk 1502 24 2: pk.reduced 751 23 column pk pk.reduced 1: CYCLE integer 2: AMT integer character data nrows ncols 1: pk 1502 24 2: pk.reduced 751 23 column pk pk.reduced 1: CYCLE integer 2: AMT integer character 3: BLQ integer integer 4: CMT integer integer 5: DOSE integer integer 6: DV numeric numeric 7: EVENTU character character 8: EVID integer integer 9: FLAG numeric numeric 10: ID integer integer 11: NAME character character 12: NOMTIME numeric numeric 13: PART integer integer 14: PROFDAY integer integer 15: PROFTIME numeric numeric 16: ROW integer integer 17: STUDY integer integer 18: TIME numeric numeric 19: TIMEUNIT character character 20: TRTACT character character 21: WEIGHTB numeric numeric 22: eff0 numeric numeric 23: flag character character 24: trtact factor factor column pk pk.reduced data nrows ncols 1: x1 1502 24 2: x2 751 23 column x1 x2 1: CYCLE integer 2: AMT integer character 3: BLQ integer integer 4: CMT integer integer 5: DOSE integer integer 6: DV numeric numeric 7: EVENTU character character 8: EVID integer integer 9: FLAG numeric numeric 10: ID integer integer 11: NAME character character 12: NOMTIME numeric numeric 13: PART integer integer 14: PROFDAY integer integer 15: PROFTIME numeric numeric 16: ROW integer integer 17: STUDY integer integer 18: TIME numeric numeric 19: TIMEUNIT character character 20: TRTACT character character 21: WEIGHTB numeric numeric 22: eff0 numeric numeric 23: flag character character 24: trtact factor factor column x1 x2 data nrows ncols 1: x1 1502 24 2: x2 751 23 column x1 x2 1: CYCLE integer 2: AMT integer character 3: BLQ integer integer 4: CMT integer integer 5: DOSE integer integer 6: DV numeric numeric 7: EVENTU character character 8: EVID integer integer 9: FLAG numeric numeric 10: ID integer integer 11: NAME character character 12: NOMTIME numeric numeric 13: PART integer integer 14: PROFDAY integer integer 15: PROFTIME numeric numeric 16: ROW integer integer 17: STUDY integer integer 18: TIME numeric numeric 19: TIMEUNIT character character 20: TRTACT character character 21: WEIGHTB numeric numeric 22: eff0 numeric numeric 23: flag character character 24: trtact factor factor column x1 x2 data nrows 1: data.table(variable = c("CPDVG", "CMDVG", "efef")) 3 2: data.table(variable = c("CPDVG", "CMDVG"), compound = c("C-1", "C-2")) 2 ncols 1: 1 2: 2 column data.table(variable = c("CPDVG", "CMDVG", "efef")) 1: compound data.table(variable = c("CPDVG", "CMDVG"), compound = c("C-1", "C-2")) 1: character data nrows ncols 1: x1 3 1 2: x2 2 2 column x1 x2 1: compound character data nrows ncols 1: pk 1502 24 2: pk.reduced 751 23 column pk pk.reduced 1: *TIME numeric numeric 2: *NAME character character 3: *NOEXISTS 4: CYCLE integer 5: AMT integer character data nrows ncols 1: pk 1502 24 2: pk.reduced 751 23 column pk pk.reduced 1: CYCLE integer 2: AMT integer character data nrows ncols 1: pk 1502 24 2: pk.reduced 751 23 column pk pk.reduced 1: CYCLE integer 2: AMT integer character data nrows ncols 1: dt1 2 2 2: dt2 2 2 3: result 4 4 Table written to testOutput/flagsCount_5.csv variable Nmissing 1: DV 150 [ FAIL 0 | WARN 0 | SKIP 1 | PASS 248 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • empty test (1): 'test_fnAppend.R:22:1' [ FAIL 0 | WARN 0 | SKIP 1 | PASS 248 ] > > proc.time() user system elapsed 16.50 0.79 17.37