* using log directory 'd:/RCompile/CRANincoming/R-devel/NADA2.Rcheck'
* using R Under development (unstable) (2024-07-29 r86934 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'NADA2/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'NADA2' version '1.1.8'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [12s] NOTE
Maintainer: 'Paul Julian <pauljulianphd@gmail.com>'

Package has a VignetteBuilder field but no prebuilt vignette index.

Found the following (possibly) invalid URLs:
  URL: https://data.ontario.ca/en/dataset/pollen-monitoring-network-study
    From: man/Pollen_Thia.Rd
    Status: Error
    Message: Could not resolve host: data.ontario.ca
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'NADA2' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [28s] NOTE
ATS: no visible binding for global variable 'xnliame'
Undefined global functions or variables:
  xnliame
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
  'Censored_Data_Analysis.Rmd'
* checking examples ... ERROR
Running examples in 'NADA2-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cen1way
> ### Title: Peto-Peto one-factor test
> ### Aliases: cen1way
> 
> ### ** Examples
> 
> data(PbHeron)
> 
> # Two Groups
> cen1way(PbHeron$Liver,PbHeron$LiverCen,PbHeron$DosageGroup)
Warning: One or more group(s) do not have censored data.
Error in ci.sample.size - 1 : non-numeric argument to binary operator
Calls: cen1way
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... WARNING
Directory 'inst/doc' does not exist.
Package vignette without corresponding single PDF/HTML:
  'Censored_Data_Analysis.Rmd'
* checking re-building of vignette outputs ... [102s] ERROR
Error(s) in re-building vignettes:
--- re-building 'Censored_Data_Analysis.Rmd' using rmarkdown

Quitting from lines 628-629 [unnamed-chunk-42] (Censored_Data_Analysis.Rmd)
Error: processing vignette 'Censored_Data_Analysis.Rmd' failed with diagnostics:
non-numeric argument to binary operator
--- failed re-building 'Censored_Data_Analysis.Rmd'

SUMMARY: processing the following file failed:
  'Censored_Data_Analysis.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [29s] OK
* checking HTML version of manual ... OK
* DONE
Status: 2 ERRORs, 2 WARNINGs, 2 NOTEs