* using log directory ‘/srv/hornik/tmp/CRAN_pretest/MethEvolSIM.Rcheck’ * using R Under development (unstable) (2025-04-10 r88129) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘MethEvolSIM/DESCRIPTION’ ... OK * this is package ‘MethEvolSIM’ version ‘0.1.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/4s] WARNING Maintainer: ‘Sara Castillo Vicente ’ New submission Package was archived on CRAN Insufficient package version (submitted: 0.1.2, existing: 0.2) Possibly misspelled words in DESCRIPTION: CpG (15:37, 15:63, 18:27, 18:58, 26:46) Methylation (2:21) Metzler (24:17) cytosines (14:79, 15:22) dinucleotide (15:41) epigenetic (12:36) methylation (12:18, 14:11, 16:23, 17:7, 21:19, 25:11, 25:94) unmethylated (19:34) CRAN repository db overrides: X-CRAN-Comment: Archived on 2025-03-31 as issues were not corrected in time This build time stamp is over a month old. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MethEvolSIM’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [0s/0s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [21s/21s] OK Running ‘testthat.R’ [21s/21s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [4s/4s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING