downloading reverse dependencies ... downloading BayesESS_0.1.19.tar.gz ... ok downloading BayesFactor_0.9.12-4.7.tar.gz ... ok downloading diagL1_1.0.0.tar.gz ... ok downloading inlabru_2.12.0.tar.gz ... ok downloading pre_1.0.7.tar.gz ... ok downloading QTOCen_0.1.1.tar.gz ... ok downloading quantreg_6.1.tar.gz ... ok downloading RGE_1.0.tar.gz ... ok downloading twang_2.6.1.tar.gz ... ok downloading twangRDC_1.0.tar.gz ... ok downloading abn_3.1.1.tar.gz ... ok downloading BayesfMRI_0.10.1.tar.gz ... ok downloading car_3.1-3.tar.gz ... ok installing dependencies ‘alr4’, ‘ciftiTools’, ‘conquer’, ‘dfcrm’, ‘excursions’, ‘fMRItools’, ‘glmertree’, ‘greekLetters’, ‘hrf’, ‘INLA’, ‘languageR’, ‘lme4’, ‘MatrixModels’, ‘quantoptr’, ‘sphereplot’ Warning: package ‘INLA’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages begin installing package ‘dfcrm’ begin installing package ‘languageR’ begin installing package ‘greekLetters’ begin installing package ‘conquer’ begin installing package ‘sphereplot’ begin installing package ‘MatrixModels’ begin installing package ‘ciftiTools’ begin installing package ‘excursions’ begin installing package ‘fMRItools’ begin installing package ‘lme4’ * installing *source* package ‘greekLetters’ ... ** this is package ‘greekLetters’ version ‘1.0.4’ ** package ‘greekLetters’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (greekLetters) * installing *source* package ‘sphereplot’ ... ** this is package ‘sphereplot’ version ‘1.5.1’ ** package ‘sphereplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sphereplot) * installing *source* package ‘dfcrm’ ... ** this is package ‘dfcrm’ version ‘0.2-2.1’ ** package ‘dfcrm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dfcrm) * installing *source* package ‘fMRItools’ ... ** this is package ‘fMRItools’ version ‘0.5.3’ ** package ‘fMRItools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fMRItools) * installing *source* package ‘languageR’ ... ** this is package ‘languageR’ version ‘1.5.0’ ** package ‘languageR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (languageR) * installing *source* package ‘MatrixModels’ ... ** this is package ‘MatrixModels’ version ‘0.5-4’ ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MatrixModels) begin installing package ‘quantoptr’ * installing *source* package ‘quantoptr’ ... ** this is package ‘quantoptr’ version ‘0.1.3’ ** package ‘quantoptr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quantoptr) * installing *source* package ‘ciftiTools’ ... ** this is package ‘ciftiTools’ version ‘0.17.4’ ** package ‘ciftiTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ciftiTools) * installing *source* package ‘excursions’ ... ** this is package ‘excursions’ version ‘2.5.8’ ** package ‘excursions’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to enable C11 features... none needed checking whether the compiler supports GNU C++... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed checking for gsl-config... /usr/bin/gsl-config checking if GSL version >= 2.1... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -ISuiteSparse_config -ICAMD/Include -I/usr/include -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RngStream.c -o RngStream.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -ISuiteSparse_config -ICAMD/Include -I/usr/include -I. -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c excursions_init.c -o excursions_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fopenmp -ISuiteSparse_config -ICAMD/Include -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c integration.cpp -o integration.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fopenmp -ISuiteSparse_config -ICAMD/Include -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c qinv.cpp -o qinv.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fopenmp -ISuiteSparse_config -ICAMD/Include -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c reordering.cpp -o reordering.o (cd CAMD && \ make -f "/home/hornik/tmp/R-d-gcc-14/etc/Makeconf" -f Makefile \ MAKE="make -f \"/home/hornik/tmp/R-d-gcc-14/etc/Makeconf\" -f Makefile" \ CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " CXXFLAGS="-g -O2 -Wall -pedantic -mtune=native " \ library) make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/CAMD' ( cd Source ; make -f "/home/hornik/tmp/R-d-gcc-14/etc/Makeconf" -f Makefile ) make[3]: Entering directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/CAMD/Source' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_aat.c -o camd_i_aat.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_1.c -o camd_i_1.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_2.c -o camd_i_2.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_dump.c -o camd_i_dump.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_postorder.c -o camd_i_postorder.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_defaults.c -o camd_i_defaults.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_order.c -o camd_i_order.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_control.c -o camd_i_control.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_info.c -o camd_i_info.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_valid.c -o camd_i_valid.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDINT -c camd_preprocess.c -o camd_i_preprocess.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_aat.c -o camd_l_aat.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_1.c -o camd_l_1.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_2.c -o camd_l_2.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_dump.c -o camd_l_dump.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_postorder.c -o camd_l_postorder.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_defaults.c -o camd_l_defaults.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_order.c -o camd_l_order.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_control.c -o camd_l_control.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_info.c -o camd_l_info.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_valid.c -o camd_l_valid.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -DDLONG -c camd_preprocess.c -o camd_l_preprocess.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I../Include -c camd_global.c -o camd_global.o ar -rcs ../../CAMD.a camd_i_aat.o camd_i_1.o camd_i_2.o camd_i_dump.o camd_i_postorder.o camd_i_defaults.o camd_i_order.o camd_i_control.o camd_i_info.o camd_i_valid.o camd_i_preprocess.o camd_l_aat.o camd_l_1.o camd_l_2.o camd_l_dump.o camd_l_postorder.o camd_l_defaults.o camd_l_order.o camd_l_control.o camd_l_info.o camd_l_valid.o camd_l_preprocess.o camd_global.o make[3]: Leaving directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/CAMD/Source' make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/CAMD' (cd SuiteSparse_config && \ make -f "/home/hornik/tmp/R-d-gcc-14/etc/Makeconf" -f Makefile \ MAKE="make -f \"/home/hornik/tmp/R-d-gcc-14/etc/Makeconf\" -f Makefile" \ CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " CXXFLAGS="-g -O2 -Wall -pedantic -mtune=native " \ library) make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/SuiteSparse_config' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DNTIMER -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rcs ../SuiteSparse_config.a SuiteSparse_config.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src/SuiteSparse_config' g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o excursions.so RngStream.o excursions_init.o integration.o qinv.o reordering.o CAMD.a SuiteSparse_config.a -lm -fopenmp -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMG1BEk/R.INSTALL28abee770fe0ad/excursions/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-excursions/00new/excursions/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (excursions) * installing *source* package ‘lme4’ ... ** this is package ‘lme4’ version ‘1.1-37’ ** package ‘lme4’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxvIfxI/R.INSTALL28abf738c68cc7/lme4/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/tmp/R-d-gcc-14/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c external.cpp -o external.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/tmp/R-d-gcc-14/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c glmFamily.cpp -o glmFamily.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/tmp/R-d-gcc-14/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c optimizer.cpp -o optimizer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/tmp/R-d-gcc-14/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c predModule.cpp -o predModule.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/tmp/R-d-gcc-14/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -Wall -pedantic -mtune=native -c respModule.cpp -o respModule.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxvIfxI/R.INSTALL28abf738c68cc7/lme4/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-lme4/00new/lme4/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lme4) begin installing package ‘alr4’ begin installing package ‘glmertree’ begin installing package ‘hrf’ * installing *source* package ‘alr4’ ... ** this is package ‘alr4’ version ‘1.0.6’ ** package ‘alr4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alr4) * installing *source* package ‘hrf’ ... ** this is package ‘hrf’ version ‘0.1.3’ ** package ‘hrf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hrf) * installing *source* package ‘glmertree’ ... ** this is package ‘glmertree’ version ‘0.2-6’ ** package ‘glmertree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmertree) * installing *source* package ‘conquer’ ... ** this is package ‘conquer’ version ‘1.3.3’ ** package ‘conquer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoXw2qG/R.INSTALL28abf2103b0c28/conquer/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c defFun.cpp -o defFun.o defFun.cpp: In function ‘void lossQr(const arma::mat&, const arma::vec&, const arma::vec&, double, int, arma::vec&, arma::vec&)’: defFun.cpp:33:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 33 | for (int k = 0; k < res.size(); k++) { | ~~^~~~~~~~~~~~ defFun.cpp: In function ‘double lossL2(const arma::mat&, const arma::vec&, const arma::vec&, double, double)’: defFun.cpp:51:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 51 | for (int i = 0; i < Y.size(); i++) { | ~~^~~~~~~~~~ defFun.cpp: In function ‘double updateL2(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double)’: defFun.cpp:62:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 62 | for (int i = 0; i < Y.size(); i++) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c highdGauss.cpp -o highdGauss.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c highdLogistic.cpp -o highdLogistic.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c highdPara.cpp -o highdPara.o highdPara.cpp: In function ‘double lossParaHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)’: highdPara.cpp:11:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdPara.cpp: In function ‘double updateParaHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)’: highdPara.cpp:24:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c highdTrian.cpp -o highdTrian.o highdTrian.cpp: In function ‘double lossTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double, double)’: highdTrian.cpp:11:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdTrian.cpp: In function ‘double updateTrianHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double, double)’: highdTrian.cpp:24:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c highdUnif.cpp -o highdUnif.o highdUnif.cpp: In function ‘double lossUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, double, double, double)’: highdUnif.cpp:11:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 11 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ highdUnif.cpp: In function ‘double updateUnifHd(const arma::mat&, const arma::vec&, const arma::vec&, arma::vec&, double, double, double, double)’: highdUnif.cpp:24:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare] 24 | for (int i = 0; i < res.size(); i++) { | ~~^~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lowd.cpp -o lowd.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o conquer.so RcppExports.o defFun.o highdGauss.o highdLogistic.o highdPara.o highdTrian.o highdUnif.o lowd.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoXw2qG/R.INSTALL28abf2103b0c28/conquer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-conquer/00new/conquer/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (conquer) checking MatrixModels_0.5-4.tar.gz ... checking BayesESS_0.1.19.tar.gz ... checking BayesFactor_0.9.12-4.7.tar.gz ... checking diagL1_1.0.0.tar.gz ... checking inlabru_2.12.0.tar.gz ... checking pre_1.0.7.tar.gz ... checking QTOCen_0.1.1.tar.gz ... checking quantreg_6.1.tar.gz ... checking RGE_1.0.tar.gz ... checking twang_2.6.1.tar.gz ... checking twangRDC_1.0.tar.gz ... checking abn_3.1.1.tar.gz ... checking BayesfMRI_0.10.1.tar.gz ... checking car_3.1-3.tar.gz ... Depends: Package: MatrixModels Depends: R (>= 3.6.0) Imports: stats, methods, Matrix (>= 1.6-0), Matrix(< 1.8-0) Timings: user system elapsed MatrixModels 45.347 4.291 51.237 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 4 9 Check results summary: MatrixModels ... OK rdepends_abn ... OK rdepends_BayesESS ... OK rdepends_BayesFactor ... OK rdepends_BayesfMRI ... OK rdepends_car ... OK rdepends_diagL1 ... NOTE * checking Rd cross-references ... NOTE rdepends_inlabru ... OK rdepends_pre ... NOTE * checking DESCRIPTION meta-information ... NOTE * checking Rd cross-references ... NOTE rdepends_QTOCen ... NOTE * checking Rd files ... [2s/2s] NOTE rdepends_quantreg ... OK rdepends_RGE ... OK rdepends_twang ... OK rdepends_twangRDC ... NOTE * checking Rd cross-references ... NOTE