Package: PSAboot Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘MatchingOrder.Rmd’ using rmarkdown Quitting from MatchingOrder.Rmd:109-121 [lalonde.psaboot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `tmp[[i]]$summary`: ! $ operator is invalid for atomic vectors --- Backtrace: ▆ 1. └─PSAboot::PSAboot(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'MatchingOrder.Rmd' failed with diagnostics: $ operator is invalid for atomic vectors --- failed re-building ‘MatchingOrder.Rmd’ --- re-building ‘PSAboot.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.plot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 292977 bytes Input file size = 293475 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 283981 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 283981 Output IDAT size = 283981 bytes (8996 bytes decrease) Output file size = 284059 bytes (9416 bytes = 3.21% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.histogram-1.png 2304x1536 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 51512 bytes Input file size = 52442 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43762 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43535 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 43117 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 43117 Output IDAT size = 43117 bytes (8395 bytes decrease) Output file size = 43195 bytes (9247 bytes = 17.63% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.boxplot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 53705 bytes Input file size = 53855 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 51931 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 51931 Output IDAT size = 51931 bytes (1774 bytes decrease) Output file size = 52009 bytes (1846 bytes = 3.43% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.matrixplot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 539153 bytes Input file size = 540011 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 436563 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 436563 Output IDAT size = 436563 bytes (102590 bytes decrease) Output file size = 436641 bytes (103370 bytes = 19.14% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.balance.plot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 109341 bytes Input file size = 109575 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 103711 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 103711 Output IDAT size = 103711 bytes (5630 bytes decrease) Output file size = 103789 bytes (5786 bytes = 5.28% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/lalonde.balance.boxplot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 176818 bytes Input file size = 177148 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 168228 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 168228 Output IDAT size = 168228 bytes (8590 bytes decrease) Output file size = 168306 bytes (8842 bytes = 4.99% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutoring.plot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 83061 bytes Input file size = 83259 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 77951 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 77951 Output IDAT size = 77951 bytes (5110 bytes decrease) Output file size = 78029 bytes (5230 bytes = 6.28% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutoring.histogram-1.png 2304x1536 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 40298 bytes Input file size = 41204 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32677 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 28849 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 28728 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 28728 Output IDAT size = 28728 bytes (11570 bytes decrease) Output file size = 28806 bytes (12398 bytes = 30.09% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutoring.boxplot-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 55270 bytes Input file size = 55420 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 53122 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 53122 Output IDAT size = 53122 bytes (2148 bytes decrease) Output file size = 53200 bytes (2220 bytes = 4.01% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutoring.matrixplot-1.png 2304x2304 pixels, 3x8 bits/pixel, RGB Input IDAT size = 343014 bytes Input file size = 343584 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 311376 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 311376 Output IDAT size = 311376 bytes (31638 bytes decrease) Output file size = 311454 bytes (32130 bytes = 9.35% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutroing.balance-1.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 100871 bytes Input file size = 101093 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 95634 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 95634 Output IDAT size = 95634 bytes (5237 bytes decrease) Output file size = 95712 bytes (5381 bytes = 5.32% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/PSAboot.Rcheck/vign_test/PSAboot/vignettes/PSAboot_files/figure-html/tutroing.balance-2.png 2304x1536 pixels, 3x8 bits/pixel, RGB Input IDAT size = 242479 bytes Input file size = 242905 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 232519 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 232519 Output IDAT size = 232519 bytes (9960 bytes decrease) Output file size = 232597 bytes (10308 bytes = 4.24% decrease) --- finished re-building ‘PSAboot.Rmd’ SUMMARY: processing the following file failed: ‘MatchingOrder.Rmd’ Error: Vignette re-building failed. Execution halted