* using log directory ‘/srv/hornik/tmp/CRAN/MRS.Rcheck’
* using R Under development (unstable) (2023-12-08 r85664)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
Debian clang version 17.0.5 (1)
Debian flang-new version 17.0.5 (1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘MRS/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MRS’ version ‘1.2.5’
* checking CRAN incoming feasibility ... [3s/6s] NOTE
Maintainer: ‘Li Ma
’
Found the following (possibly) invalid URLs:
URL: http://arxiv.org/abs/1604.01443 (moved to https://arxiv.org/abs/1604.01443)
From: man/andova.Rd
man/plot1D.Rd
man/plot2D.Rd
man/plotTree.Rd
man/print.summary.mrs.Rd
man/summary.mrs.Rd
Status: 301
Message: Moved Permanently
URL: http://onlinelibrary.wiley.com/doi/10.1111/rssb.12180/abstract (moved to https://rss.onlinelibrary.wiley.com/doi/abs/10.1111/rssb.12180)
From: man/mrs.Rd
man/plot1D.Rd
man/plot2D.Rd
man/plotTree.Rd
man/print.summary.mrs.Rd
man/summary.mrs.Rd
Status: 301
Message: Moved Permanently
For content that is 'Moved Permanently', please change http to https,
add trailing slashes, or replace the old by the new URL.
The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘MRS’ can be installed ... [24s/24s] OK
* used C++ compiler: ‘Debian clang version 17.0.5 (1)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [3s/3s] NOTE
Found if() conditions comparing class() to string:
File ‘MRS/R/plot1D.R’: if (class(ans) != "mrs") ...
File ‘MRS/R/plot2D.R’: if (class(ans) != "mrs") ...
File ‘MRS/R/plotTree.R’: if (class(ans) != "mrs") ...
File ‘MRS/R/summary.mrs.R’: if (class(object) != "mrs") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [2s/2s] OK
* checking PDF version of manual ... [3s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs