* installing *source* package ‘MPCR’ ... ** using staged installation /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR -- The C compiler identification is Clang 17.0.4 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang-17 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- WORKING ON RELEASE MODE -- Found OpenMP_C: -fopenmp=libomp -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") OpenMp Found R Include Path : /home/hornik/tmp/R-d-clang-17/include Rcpp Lib Path : /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp R Home Path : /home/hornik/tmp/R-d-clang-17 -- Found R: /home/hornik/tmp/R-d-clang-17/include;/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include -- Using R technology -- Build Serial Support -- ---------------------------------------- BLAS++ -- Checking for BLAS++ ---------------------------------------- BLAS -- Checking for BLAS -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found OpenMP_C: -fopenmp=libomp -- Found OpenMP: TRUE found components: C -- Fetching blas 6287a23 from https://github.com/xianyi/OpenBLAS CMake Deprecation Warning at CMakeLists.txt:5 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is Clang 17.0.4 -- The ASM compiler identification is Clang with GNU-like command-line -- Found assembler: /usr/bin/clang-17 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang-17 - skipped -- Detecting C compile features -- Detecting C compile features - done CMake Warning at CMakeLists.txt:94 (message): CMake support is experimental. It does not yet support all build options and may not produce the same Makefiles that OpenBLAS ships with. CMake Warning (dev) at cmake/system_check.cmake:13 (if): Policy CMP0054 is not set: Only interpret if() arguments as variables or keywords when unquoted. Run "cmake --help-policy CMP0054" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Quoted variables like "LINUX" will no longer be dereferenced when the policy is set to NEW. Since the policy is not set the OLD behavior will be used. Call Stack (most recent call first): cmake/system.cmake:8 (include) CMakeLists.txt:97 (include) This warning is for project developers. 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/srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_rt.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_rt.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_ct.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_ct.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_ct.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_ct.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_nr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_nr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_nr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_nr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_tr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_tr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_tr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_tr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_rr.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_rr.c -- 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/srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_nc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_nc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_tc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_tc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_thread_tc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_thread_tc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm_rc.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/level3/CMakeFiles/zgemm3m_rc.c -- 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/srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/driver/others/CMakeFiles/openblas_get_parallel.c -- Reading vars from /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-src/kernel/x86_64/KERNEL... -- Reading vars from /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-src/kernel/x86_64/KERNEL.SKYLAKEX... -- Reading vars from /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-src/kernel/x86_64/KERNEL.HASWELL... -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/kernel/CMakeFiles/lsame.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/kernel/CMakeFiles/scabs1.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/kernel/CMakeFiles/dcabs1.c -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/kernel/CMakeFiles/samax_k.S -- /srv/hornik/tmp/CRAN/MPCR.Rcheck/00_pkg_src/MPCR/bin/_deps/blas-bin/kernel/CMakeFiles/samin_k.S -- 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sequential, gfortran libs: -lmkl_gf_lp64 -lmkl_sequential -lmkl_core -DBLAS_FORTRAN_ADD_  no (library not found) Intel MKL ilp64, sequential, gfortran libs: -lmkl_gf_ilp64 -lmkl_sequential -lmkl_core -DBLAS_FORTRAN_ADD_  no (library not found) Intel MKL lp64, sequential, ifort libs: -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -DBLAS_FORTRAN_ADD_  no (library not found) Intel MKL ilp64, sequential, ifort libs: -lmkl_intel_ilp64 -lmkl_sequential -lmkl_core -DBLAS_FORTRAN_ADD_  no (library not found) IBM ESSL int (lp64), multi-threaded, with OpenMP libs: -lesslsmp -DBLAS_FORTRAN_ADD_  no (library not found) IBM ESSL int64 (ilp64), multi-threaded, with OpenMP libs: -lesslsmp6464 -DBLAS_FORTRAN_ADD_  no (library not found) IBM ESSL int (lp64), sequential libs: -lessl -DBLAS_FORTRAN_ADD_  no (library not found) IBM ESSL int64 (ilp64), sequential libs: -lessl6464 -DBLAS_FORTRAN_ADD_  no (library not found) OpenBLAS libs: -lopenblas -DBLAS_FORTRAN_ADD_  yes  Found BLAS library: -lopenblas -- Checking BLAS library version -- Checking BLAS complex return type  BLAS (zdotc) returns complex (GNU gfortran convention) -- Checking BLAS float return type  BLAS (sdot) returns float as float (standard) -- Checking for CBLAS library  Found CBLAS library  -- Looking for LAPACK libraries and options (lapack = auto) In BLAS library  yes  Found LAPACK library in BLAS library -- BLAS++ done ---------------------------------------- LAPACK -- Checking for LAPACK -- Found BLAS: -lopenblas -- Looking for clatms_ -- Looking for clatms_ - found -- Found LAPACK: -lopenblas;-lm;-ldl Found LAPACK: -lopenblas;-lm;-ldl -- LAPACK done ---------------------------------------- LAPACK++ -- Checking for LAPACK++ ---------------------------------------- LAPACK -- Checking for LAPACK Found LAPACK: -lopenblas;-lm;-ldl -- LAPACK done -- Fetching LAPACK++ v2023.06.00 from https://github.com/icl-utk-edu/lapackpp -- Using CMAKE_INSTALL_PREFIX = /usr/local -- Looking for CUDA (gpu_backend = auto) -- No CUDA 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src/CMakeFiles/mpcr.dir/data-units/MPCRTile.cpp.o [100%] Linking CXX shared library libmpcr.so [100%] Built target mpcr ** libs make: Nothing to be done for 'all'. installing to /srv/hornik/tmp/CRAN/MPCR.Rcheck/00LOCK-MPCR/00new/MPCR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Creating a generic function for ‘storage.mode’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘typeof’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘which.min’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘which.max’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘sweep’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘svd’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘svd’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘La.svd’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘eigen’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘backsolve’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘rcond’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘rcond’ from package ‘base’ in package ‘MPCR’ ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Creating a generic function for ‘storage.mode’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘typeof’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘which.min’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘which.max’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘sweep’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘svd’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘svd’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘La.svd’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘eigen’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘backsolve’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘MPCR’ Creating a generic function for ‘rcond’ from ‘base’ in package ‘MPCR’ (from the saved implicit definition) Creating a generic function for ‘rcond’ from package ‘base’ in package ‘MPCR’ ** testing if installed package keeps a record of temporary installation path * DONE (MPCR)