* using log directory 'd:/RCompile/CRANincoming/R-devel/MERLIN.Rcheck'
* using R Under development (unstable) (2025-10-31 r88977 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'MERLIN/DESCRIPTION' ... OK
* this is package 'MERLIN' version '1.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... ERROR
Maintainer: 'Peng Sun <sunpeng@sues.edu.cn>'

New submission

Conflicting package names (submitted: MERLIN, existing: merlin [CRAN archive])

Possibly misspelled words in DESCRIPTION:
  GWIS (12:38)
  INteraction (2:54, 9:57)
  MEndelian (2:19, 9:22)

Authors@R field gives persons with deprecated or bad elements:
  Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]],  :
    Invalid ORCID iD: 'shilab-ecnu'.

The Title field starts with the package name.

The Description field should not start with the package name,
  'This package' or similar.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'MERLIN' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Authors@R field gives persons with invalid ORCID identifiers:
  Xingjie Shi [aut] (ORCID: shilab-ecnu)
Author field differs from that derived from Authors@R
  Author:    'Yadong Yang [aut], Minxi Bai [aut], Peng Sun [aut, cre], Xingjie Shi [aut] (shilab-ecnu)'
  Authors@R: 'Yadong Yang [aut], Minxi Bai [aut], Peng Sun [aut, cre], Xingjie Shi [aut] (ORCID: shilab-ecnu)'

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... WARNING
File 'MERLIN/libs/x64/MERLIN.dll':
  Found '_ZSt4cout', possibly from 'std::cout' (C++)
    Objects: 'CalCorr.o', 'data_loader.o', 'pdsoft.o'
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
    Objects: 'CalCorr.o', 'RcppExports.o', 'data_loader.o'

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [11s] OK
* checking PDF version of manual ... [19s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE