* installing *source* package ‘MAGMA.R’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘ggplot2::%+%’ by ‘psych::%+%’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘ggplot2::alpha’ by ‘psych::alpha’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::when’ by ‘purrr::when’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘flextable::compose’ by ‘purrr::compose’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::accumulate’ by ‘purrr::accumulate’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::lag’ by ‘stats::lag’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::filter’ by ‘stats::filter’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::chisq.test’ by ‘stats::chisq.test’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::fisher.test’ by ‘stats::fisher.test’ when loading ‘MAGMA.R’
Note: wrong number of arguments to 'sqrt' 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘ggplot2::%+%’ by ‘psych::%+%’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘ggplot2::alpha’ by ‘psych::alpha’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::when’ by ‘purrr::when’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘flextable::compose’ by ‘purrr::compose’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::accumulate’ by ‘purrr::accumulate’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::lag’ by ‘stats::lag’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::filter’ by ‘stats::filter’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::chisq.test’ by ‘stats::chisq.test’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::fisher.test’ by ‘stats::fisher.test’ when loading ‘MAGMA.R’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘ggplot2::%+%’ by ‘psych::%+%’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘ggplot2::alpha’ by ‘psych::alpha’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::when’ by ‘purrr::when’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘flextable::compose’ by ‘purrr::compose’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘foreach::accumulate’ by ‘purrr::accumulate’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::lag’ by ‘stats::lag’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘dplyr::filter’ by ‘stats::filter’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::chisq.test’ by ‘stats::chisq.test’ when loading ‘MAGMA.R’
Warning: replacing previous import ‘janitor::fisher.test’ by ‘stats::fisher.test’ when loading ‘MAGMA.R’
** testing if installed package keeps a record of temporary installation path
* DONE (MAGMA.R)