R Under development (unstable) (2024-04-27 r86487 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(MAGEE) > Sys.setenv(MKL_NUM_THREADS = 1) > > test_check("MAGEE") Automatic allele flipping enabled... Variants matching alt/ref but not ref/alt alleles will also be included, with flipped effects Automatic allele flipping enabled... Variants matching alt/ref but not ref/alt alleles will also be included, with flipped effects [ FAIL 0 | WARN 0 | SKIP 13 | PASS 114 ] ══ Skipped tests (13) ══════════════════════════════════════════════════════════ • On CRAN (13): 'test_MAGEE.R:62:3', 'test_MAGEE.R:118:3', 'test_MAGEE.R:235:3', 'test_MAGEE.R:353:3', 'test_MAGEE.meta.R:24:3', 'test_MAGEE.meta.R:44:3', 'test_MAGEE.meta.R:76:3', 'test_MAGEE.meta.R:106:3', 'test_MAGEE.meta.R:137:3', 'test_MAGEE.meta.R:160:3', 'test_glmm.gei.R:235:3', 'test_glmm.gei.R:529:3', 'test_glmm.gei.R:1056:3' [ FAIL 0 | WARN 0 | SKIP 13 | PASS 114 ] > > proc.time() user system elapsed 49.82 0.92 50.75