* using log directory ‘/srv/hornik/tmp/CRAN/LogicForest.Rcheck’
* using R Under development (unstable) (2024-03-05 r86054)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 17.0.6 (5)
    Debian flang-new version 17.0.6 (5)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘LogicForest/DESCRIPTION’ ... OK
* this is package ‘LogicForest’ version ‘2.1.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [2s/2s] NOTE
Maintainer: ‘Melica Nikahd <melica.nikahd@osumc.edu>’

New submission

Package was archived on CRAN

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2018-06-17 as check problems were not
    corrected despite reminders.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘LogicForest’ can be installed ... [3s/3s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s/5s] OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  ‘Perms’ ‘TTab’ ‘logforest’ ‘p.combos’ ‘pimp.import’ ‘pimp.mat’
  ‘prime.imp’ ‘proportion.positive’
Undocumented data sets:
  ‘LF.data’
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [1s/1s] ERROR
Error(s) in re-building vignettes:
  ...
--- re-building ‘Intro_to_logicforest.Rmd’ using rmarkdown

Quitting from lines 25-49 [unnamed-chunk-2] (Intro_to_logicforest.Rmd)
Error: processing vignette 'Intro_to_logicforest.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘Intro_to_logicforest.Rmd’

SUMMARY: processing the following file failed:
  ‘Intro_to_logicforest.Rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [2s/2s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE