* using log directory ‘/srv/hornik/tmp/CRAN/LightLogR.Rcheck’ * using R Under development (unstable) (2024-07-03 r86870) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (1+b1) Debian flang-new version 18.1.8 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘LightLogR/DESCRIPTION’ ... OK * this is package ‘LightLogR’ version ‘0.3.8’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [5s/7s] NOTE Maintainer: ‘Johannes Zauner ’ New submission Found the following (possibly) invalid URLs: URL: https://lists.lrz.de/mailman/listinfo/lightlogr-users From: README.md Status: 403 Message: Forbidden * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘LightLogR’ can be installed ... [3s/3s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking whether startup messages can be suppressed ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s/5s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: symlog_trans.Rd: ggplot Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [29s/28s] ERROR Running examples in ‘LightLogR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: symlog_trans > ### Title: Scale positive and negative values on a log scale > ### Aliases: symlog_trans > > ### ** Examples > > dataset <- + sample.data.environment %>% + filter_Date(end = "2023-08-15") %>% + dplyr::mutate(MEDI = dplyr::case_when( + Id == "Environment" ~ -MEDI, + .default = MEDI)) > #basic application where transformation, breaks and labels are set manually > dataset %>% + gg_day(aes_col = Id) + + ggplot2::scale_y_continuous( + trans = "symlog") Scale for y is already present. Adding another scale for y, which will replace the existing scale. > > #the same plot, but with breaks and labels set manually > dataset %>% + gg_day(aes_col = Id) +y Error: object 'y' not found Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [9s/9s] OK Running ‘testthat.R’ [9s/9s] * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [2s/2s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 2 NOTEs