* using log directory 'd:/RCompile/CRANincoming/R-devel/Leonov.Rcheck' * using R Under development (unstable) (2024-01-07 r85787 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'Leonov/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'Leonov' version '1.0' * checking CRAN incoming feasibility ... NOTE Maintainer: 'Vadim Leonov <22vale@suni.se>' New submission Possibly misspelled words in DESCRIPTION: FisherGSA (3:8, 8:18, 8:518) bioinformatics (8:597) phenotypes (8:313) Size of tarball: 21905227 bytes Found the following \keyword or \concept entries which likely give several index terms: File 'Leonov-package.Rd': \keyword{ package, gene-set analysis, Fisher metho [TRUNCATED] File 'data_matrix.Rd': \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED] File 'data_vector.Rd': \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED] File 'gene_set_p_values.Rd': \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED] File 'printGSAfisher.Rd': \keyword{print, gene-set analysis, Fisher method} File 'summaryGSAfisher.Rd': \keyword{summary, gene-set analysis, Fisher method [TRUNCATED] * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'Leonov' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 NOTE