* using log directory ‘/srv/hornik/tmp/CRAN/Leonov.Rcheck’
* using R Under development (unstable) (2024-01-08 r85793)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 17.0.6 (3)
    Debian flang-new version 17.0.6 (3)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘Leonov/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Leonov’ version ‘1.0’
* checking CRAN incoming feasibility ... [2s/2s] NOTE
Maintainer: ‘Vadim Leonov <22vale@suni.se>’

New submission

Possibly misspelled words in DESCRIPTION:
  FisherGSA (3:8, 8:18, 8:518)
  bioinformatics (8:597)
  phenotypes (8:313)

Size of tarball: 21905227 bytes

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘Leonov-package.Rd’:
    \keyword{ package, gene-set analysis, Fisher metho [TRUNCATED]
  File ‘data_matrix.Rd’:
    \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED]
  File ‘data_vector.Rd’:
    \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED]
  File ‘gene_set_p_values.Rd’:
    \keyword{datasets, gene-set analysis, synthetic da [TRUNCATED]
  File ‘printGSAfisher.Rd’:
    \keyword{print, gene-set analysis, Fisher method}
  File ‘summaryGSAfisher.Rd’:
    \keyword{summary, gene-set analysis, Fisher method [TRUNCATED]
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘Leonov’ can be installed ... [1s/1s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [2s/2s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [1s/1s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [2s/2s] OK
* checking PDF version of manual ... [3s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE