R Under development (unstable) (2023-11-07 r85491 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > ## * load packages > library(testthat) > library(LMMstar) LMMstar version 1.0.0 Attaching package: 'LMMstar' The following object is masked from 'package:base': remove > > library(data.table) > library(emmeans) > library(ggplot2) > library(lava) Attaching package: 'lava' The following object is masked from 'package:ggplot2': vars The following object is masked from 'package:testthat': compare > library(lme4) Loading required package: Matrix > library(lmerTest) Attaching package: 'lmerTest' The following object is masked from 'package:lme4': lmer The following object is masked from 'package:stats': step > library(mice) Attaching package: 'mice' The following object is masked from 'package:stats': filter The following objects are masked from 'package:base': cbind, rbind > library(multcomp) Loading required package: mvtnorm Loading required package: survival Loading required package: TH.data Loading required package: MASS Attaching package: 'TH.data' The following object is masked from 'package:MASS': geyser > library(nlme) Attaching package: 'nlme' The following object is masked from 'package:lme4': lmList > library(numDeriv) > library(reshape2) Attaching package: 'reshape2' The following objects are masked from 'package:data.table': dcast, melt > library(qqtest) Attaching package: 'qqtest' The following object is masked from 'package:MASS': bacteria > > ## * run tests > ## setwd("~/Documents/GitHub/LMMstar/tests/") > ## setwd("c:/Users/hpl802/Documents/Github/LMMstar/tests/") > test_check("LMMstar") [ FAIL 0 | WARN 0 | SKIP 13 | PASS 376 ] ══ Skipped tests (13) ══════════════════════════════════════════════════════════ • Not run to save time in the check (13): 'test-manual-armd.R:50:31', 'test-manual-armd.R:62:31', 'test-manual-armd.R:103:31', 'test-manual-armd.R:145:31', 'test-manual-armd.R:179:31', 'test-manual-armd.R:229:31', 'test-manual-armd.R:248:31', 'test-manual-tutorial.R:51:31', 'test-manual-tutorial.R:75:31', 'test-manual-tutorial.R:122:31', 'test-manual-tutorial.R:165:31', 'test-manual-tutorial.R:205:31', 'test-manual-tutorial.R:305:31' [ FAIL 0 | WARN 0 | SKIP 13 | PASS 376 ] > > proc.time() user system elapsed 57.46 1.62 59.07