* installing *source* package ‘JMbayes2’ ...
** this is package ‘JMbayes2’ version ‘0.6-0’
** using staged installation
** libs
using C compiler: ‘Debian clang version 21.1.8 (1+b1)’
using C++ compiler: ‘Debian clang version 21.1.8 (1+b1)’
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_USE_CURRENT -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_USE_CURRENT -fpic  -g -O3 -Wall -pedantic   -c mcmc_fit.cpp -o mcmc_fit.o
mcmc_fit.cpp:1379:38: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
 1379 |                     lags_i.at(pos) = abs(times_i.at(j) - times_i.at(k));
      |                                      ^
mcmc_fit.cpp:1379:38: note: use function 'std::abs' instead
 1379 |                     lags_i.at(pos) = abs(times_i.at(j) - times_i.at(k));
      |                                      ^~~
      |                                      std::abs
1 warning generated.
clang++-21 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o JMbayes2.so RcppExports.o init.o mcmc_fit.o -llapack -L/home/hornik/tmp/R-d-clang-21/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R-d-clang-21/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/JMbayes2.Rcheck/00LOCK-JMbayes2/00new/JMbayes2/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (JMbayes2)