downloading reverse dependencies ... downloading bootnet_1.6.tar.gz ... ok downloading IMEC_0.2.0.tar.gz ... ok downloading psychonetrics_0.13.tar.gz ... ok downloading IsingFit_0.4.tar.gz ... ok downloading Isinglandr_0.1.1.tar.gz ... ok downloading NetworkComparisonTest_2.2.2.tar.gz ... ok downloading rIsing_0.1.0.tar.gz ... ok installing dependencies ‘bootnet’, ‘GGMncv’, ‘graphicalVAR’, ‘IsingFit’, ‘IsingSampler’, ‘metaSEM’, ‘mgm’, ‘NetworkToolbox’, ‘networktools’, ‘relaimpo’, ‘simlandr’, ‘VCA’ also installing the dependencies ‘eigenmodel’, ‘Sim.DiffProc’ begin installing package ‘eigenmodel’ begin installing package ‘Sim.DiffProc’ begin installing package ‘IsingFit’ begin installing package ‘IsingSampler’ begin installing package ‘mgm’ begin installing package ‘GGMncv’ begin installing package ‘graphicalVAR’ begin installing package ‘relaimpo’ begin installing package ‘VCA’ begin installing package ‘metaSEM’ * installing *source* package ‘eigenmodel’ ... ** this is package ‘eigenmodel’ version ‘1.11’ ** package ‘eigenmodel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eigenmodel) begin installing package ‘networktools’ * installing *source* package ‘IsingFit’ ... ** this is package ‘IsingFit’ version ‘0.4’ ** package ‘IsingFit’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IsingFit) begin installing package ‘NetworkToolbox’ * installing *source* package ‘relaimpo’ ... ** this is package ‘relaimpo’ version ‘2.2-7’ ** package ‘relaimpo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (relaimpo) * installing *source* package ‘VCA’ ... ** this is package ‘VCA’ version ‘1.5.1’ ** package ‘VCA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEFV8Nv/R.INSTALL96ae318cfb596/VCA/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c vca.f95 -o vca.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o VCA.so init.o vca.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEFV8Nv/R.INSTALL96ae318cfb596/VCA/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-VCA/00new/VCA/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (VCA) * installing *source* package ‘metaSEM’ ... ** this is package ‘metaSEM’ version ‘1.5.0’ ** package ‘metaSEM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaSEM) * installing *source* package ‘mgm’ ... ** this is package ‘mgm’ version ‘1.2-15’ ** package ‘mgm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mgm) * installing *source* package ‘networktools’ ... ** this is package ‘networktools’ version ‘1.6.0’ ** package ‘networktools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (networktools) * installing *source* package ‘NetworkToolbox’ ... ** this is package ‘NetworkToolbox’ version ‘1.4.4’ ** package ‘NetworkToolbox’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NetworkToolbox) * installing *source* package ‘IsingSampler’ ... ** this is package ‘IsingSampler’ version ‘0.2.4’ ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUSSybl/R.INSTALL96ada4ad30516/IsingSampler/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c IsingCpp_CFTP.cpp -o IsingCpp_CFTP.o IsingCpp_CFTP.cpp: In function ‘Rcpp::NumericVector Broderick2013(Rcpp::IntegerMatrix, int, int, int, Rcpp::IntegerVector)’: IsingCpp_CFTP.cpp:639:7: warning: unused variable ‘N’ [-Wunused-variable] 639 | int N = x.nrow(); | ^ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PseudoLikelihood.cpp -o PseudoLikelihood.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o IsingSampler.so IsingCpp_CFTP.o PseudoLikelihood.o RcppExports.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUSSybl/R.INSTALL96ada4ad30516/IsingSampler/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-IsingSampler/00new/IsingSampler/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IsingSampler) begin installing package ‘bootnet’ * installing *source* package ‘Sim.DiffProc’ ... ** this is package ‘Sim.DiffProc’ version ‘4.9’ ** package ‘Sim.DiffProc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPVls5p/R.INSTALL96add5c512890/Sim.DiffProc/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Sim.DiffProc.c -o Sim.DiffProc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Sim.DiffProc.so Sim.DiffProc.o init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPVls5p/R.INSTALL96add5c512890/Sim.DiffProc/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Sim.DiffProc/00new/Sim.DiffProc/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Sim.DiffProc) begin installing package ‘simlandr’ * installing *source* package ‘GGMncv’ ... ** this is package ‘GGMncv’ version ‘2.1.1’ ** package ‘GGMncv’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking how to run the C++ preprocessor... g++-14 -std=gnu++17 -E checking for macOS... not found as on Linux checking for OpenMP... found configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBJcLRq/R.INSTALL96ad825e86cf8/GGMncv/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c ggmncv_fast.cpp -o ggmncv_fast.o g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o GGMncv.so RcppExports.o ggmncv_fast.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBJcLRq/R.INSTALL96ad825e86cf8/GGMncv/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-GGMncv/00new/GGMncv/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GGMncv) * installing *source* package ‘simlandr’ ... ** this is package ‘simlandr’ version ‘0.4.0’ ** package ‘simlandr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (simlandr) * installing *source* package ‘graphicalVAR’ ... ** this is package ‘graphicalVAR’ version ‘0.3.4’ ** package ‘graphicalVAR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPYbJuu/R.INSTALL96ad64dcb9f2e/graphicalVAR/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_DONT_USE_OPENMP -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_DONT_USE_OPENMP -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Rothmana.cpp -o Rothmana.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o graphicalVAR.so RcppExports.o Rothmana.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPYbJuu/R.INSTALL96ad64dcb9f2e/graphicalVAR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-graphicalVAR/00new/graphicalVAR/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graphicalVAR) * installing *source* package ‘bootnet’ ... ** this is package ‘bootnet’ version ‘1.6’ ** package ‘bootnet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bootnet) checking IsingSampler_0.2.4.tar.gz ... checking IMEC_0.2.0.tar.gz ... checking bootnet_1.6.tar.gz ... checking psychonetrics_0.13.tar.gz ... checking IsingFit_0.4.tar.gz ... checking Isinglandr_0.1.1.tar.gz ... checking NetworkComparisonTest_2.2.2.tar.gz ... checking rIsing_0.1.0.tar.gz ... Depends: Package: IsingSampler Depends: Rcpp (>= 0.10.4), R (>= 3.0.0) Imports: plyr, magrittr, nnet, dplyr LinkingTo: Rcpp Timings: user system elapsed IsingSampler 40.263 3.766 44.725 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 6 Check results summary: IsingSampler ... OK rdepends_bootnet ... OK rdepends_IMEC ... OK rdepends_IsingFit ... OK rdepends_Isinglandr ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_NetworkComparisonTest ... OK rdepends_psychonetrics ... OK rdepends_rIsing ... OK Check results changes: Package: IsingFit Check: CRAN incoming feasibility Old result: NOTE Package: psychonetrics Check: CRAN incoming feasibility Old result: NOTE