* using log directory 'd:/RCompile/CRANincoming/R-devel/INLAjoint.Rcheck' * using R Under development (unstable) (2023-10-25 r85412 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'INLAjoint/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'INLAjoint' version '23.10.26' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Denis Rustand ' New submission Possibly misspelled words in DESCRIPTION: INLA (4:23, 20:248, 20:383) INLAjoint (20:14, 20:599) Suggests or Enhances not in mainstream repositories: INLA Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. The Title field should be in title case. Current version is: 'Multivariate joint modeling for longitudinal and time-to-event outcomes with INLA' In title case that is: 'Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with INLA' The Description field should not start with the package name, 'This package' or similar. * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: 'INLA' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'INLAjoint' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE Maintainer field differs from that derived from Authors@R Maintainer: 'Denis Rustand ' Authors@R: 'Denis Rustand ' * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' call to 'INLA' in package code. Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [17s] OK * checking Rd files ... NOTE checkRd: (-1) joint.rerun.Rd:15: Lost braces 15 | An object of class code{INLAjoint} containing a model fitted with the joint() function. | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 5 NOTEs