## --------------------------------------------------------------------------------------- context("setting priors for random levels") test_that("Hmsc returns error when nfMin > nfMax", { expect_error(setPriors(TD$rL1, nfMin=10, nfMax=5), NULL) }) test_that("Hmsc returns error when alpha prior is incorrect", { expect_error(setPriors(TD$rL2, alphapw = matrix(c(0,1,1,2),nrow=2,ncol=2)), NULL) expect_error(setPriors(TD$rL1, alphapw = matrix(c(0,1,1,2))), NULL) }) test_that("Priors are correct", { expect_equal(setPriors(TD$rL1,nfMax=2, nfMin=2),TD$rL1) expect_equal(setPriors(TD$rL2,nfMax=2, nfMin=2),TD$rL2) }) ## --------------------------------------------------------------------------------------- context("setting priors for fixed effects") test_that("Hmsc returns error when phylo prior is incorrect", { m = Hmsc(Y = matrix(1:10),X = matrix(1:10)) expect_error(setPriors(m, rhopw = matrix(c(0,1,1,2),nrow=2,ncol=2)), NULL) expect_error(setPriors(TD$m, rhopw = matrix(c(0,1,1,2))), NULL) }) test_that("Priors are correct", { expect_equal(setPriors(TD$m),TD$m) })