R Under development (unstable) (2026-01-13 r89301 ucrt) -- "Unsuffered Consequences" Copyright (C) 2026 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(HaDeX2) > > options(digits=10) > > test_check("HaDeX2") [ FAIL 0 | WARN 10 | SKIP 30 | PASS 600 ] ══ Skipped tests (30) ══════════════════════════════════════════════════════════ • On CRAN (26): 'test-create_overlap_distribution_dataset.R:4:1', 'test-plot_coverage.R:7:1', 'test-plot_differential.R:16:1', 'test-plot_differential.R:26:1', 'test-plot_differential.R:34:1', 'test-plot_differential.R:40:1', 'test-plot_differential.R:48:1', 'test-plot_differential.R:54:1', 'test-plot_differential_butterfly.R:33:1', 'test-plot_differential_butterfly.R:44:1', 'test-plot_differential_chiclet.R:24:1', 'test-plot_differential_chiclet.R:36:1', 'test-plot_differential_uptake_curve.R:6:1', 'test-plot_differential_uptake_curve.R:25:1', 'test-plot_differential_uptake_curve.R:37:1', 'test-plot_differential_uptake_curve.R:47:1', 'test-plot_overlap.R:6:1', 'test-plot_peptide_charge_measurement.R:10:1', 'test-plot_peptide_mass_measurement.R:10:1', 'test-plot_replicate_histogram.R:7:1', 'test-plot_replicate_histogram.R:11:1', 'test-plot_replicate_mass_uptake.R:6:1', 'test-plot_replicate_mass_uptake.R:13:1', 'test-plot_state_comparison.R:26:1', 'test-plot_uptake_curve.R:25:1', 'test-quality_control.R:28:1' • empty test (4): , , , [ FAIL 0 | WARN 10 | SKIP 30 | PASS 600 ] > > proc.time() user system elapsed 46.62 3.06 49.31