downloading reverse dependencies ‘bsub’, ‘circlize’, ‘GetoptLong’, ‘pkgndep’, ‘rim’, ‘spiralize’ trying URL 'file:///data/Repositories/CRAN/src/contrib/bsub_2.0.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/circlize_0.4.18.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/GetoptLong_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pkgndep_1.99.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rim_0.8.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/spiralize_1.1.1.tar.gz' installing dependencies ‘base64’, ‘BiocVersion’, ‘GlobalOptions’, ‘grImport’, ‘Rook’ begin installing package ‘BiocVersion’ begin installing package ‘Rook’ begin installing package ‘base64’ begin installing package ‘grImport’ begin installing package ‘GlobalOptions’ * installing *source* package ‘BiocVersion’ ... ** this is package ‘BiocVersion’ version ‘3.23.1’ ** using staged installation ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocVersion) * installing *source* package ‘base64’ ... ** this is package ‘base64’ version ‘2.0.2’ ** package ‘base64’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64) * installing *source* package ‘GlobalOptions’ ... ** this is package ‘GlobalOptions’ version ‘0.1.4’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GlobalOptions) * installing *source* package ‘grImport’ ... ** this is package ‘grImport’ version ‘0.9-7’ ** package ‘grImport’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘explode’ in package ‘grImport’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (grImport) * installing *source* package ‘Rook’ ... ** this is package ‘Rook’ version ‘1.2’ ** package ‘Rook’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJjCN4P/R.INSTALL3e0e594e96ec8/Rook/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rook.c -o rook.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o Rook.so rook.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJjCN4P/R.INSTALL3e0e594e96ec8/Rook/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rook/00new/Rook/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rook) checking GlobalOptions_0.1.4.tar.gz ... checking bsub_2.0.6.tar.gz ... checking circlize_0.4.18.tar.gz ... checking GetoptLong_1.1.0.tar.gz ... checking pkgndep_1.99.3.tar.gz ... checking rim_0.8.1.tar.gz ... checking spiralize_1.1.1.tar.gz ... Depends: Package: GlobalOptions Depends: R (>= 3.3.0), methods Imports: utils Timings: user system elapsed GlobalOptions 21.744 3.585 29.265 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 1 5 Check results summary: GlobalOptions ... NOTE * checking CRAN incoming feasibility ... [4s/5s] NOTE rdepends_bsub ... OK rdepends_circlize ... OK rdepends_GetoptLong ... OK rdepends_pkgndep ... NOTE * checking dependencies in R code ... NOTE rdepends_rim ... OK rdepends_spiralize ... OK