downloading reverse dependencies ‘bsub’, ‘pkgndep’, ‘reproducer’, ‘spiralize’, ‘GlobalOptions’, ‘ProjectTemplate’ trying URL 'file:///data/Repositories/CRAN/src/contrib/bsub_2.0.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pkgndep_1.99.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/reproducer_0.5.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/spiralize_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/GlobalOptions_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ProjectTemplate_0.11.2.tar.gz' installing dependencies ‘base64’, ‘BiocVersion’, ‘feather’, ‘GetoptLong’, ‘grImport’, ‘log4r’, ‘RJDBC’, ‘Rook’ begin installing package ‘BiocVersion’ begin installing package ‘Rook’ begin installing package ‘base64’ begin installing package ‘grImport’ begin installing package ‘feather’ begin installing package ‘log4r’ begin installing package ‘RJDBC’ begin installing package ‘GetoptLong’ * installing *source* package ‘BiocVersion’ ... ** this is package ‘BiocVersion’ version ‘3.23.1’ ** using staged installation ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocVersion) * installing *source* package ‘base64’ ... ** this is package ‘base64’ version ‘2.0.2’ ** package ‘base64’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64) * installing *source* package ‘log4r’ ... ** this is package ‘log4r’ version ‘0.4.4’ ** package ‘log4r’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpplvvxB/R.INSTALL3de6636c718f9d/log4r/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c log4r.c -o log4r.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logfmt.c -o logfmt.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o log4r.so log4r.o logfmt.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpplvvxB/R.INSTALL3de6636c718f9d/log4r/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-log4r/00new/log4r/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (log4r) * installing *source* package ‘feather’ ... ** this is package ‘feather’ version ‘0.4.0’ ** package ‘feather’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (feather) * installing *source* package ‘grImport’ ... ** this is package ‘grImport’ version ‘0.9-7’ ** package ‘grImport’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘explode’ in package ‘grImport’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (grImport) * installing *source* package ‘GetoptLong’ ... ** this is package ‘GetoptLong’ version ‘1.1.1’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GetoptLong) * installing *source* package ‘Rook’ ... ** this is package ‘Rook’ version ‘1.2’ ** package ‘Rook’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp86r3WA/R.INSTALL3de65b728109a3/Rook/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rook.c -o rook.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o Rook.so rook.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp86r3WA/R.INSTALL3de65b728109a3/Rook/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rook/00new/Rook/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rook) * installing *source* package ‘RJDBC’ ... ** this is package ‘RJDBC’ version ‘0.2-10’ ** package ‘RJDBC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RJDBC) checking GetoptLong_1.1.1.tar.gz ... checking bsub_2.0.6.tar.gz ... checking pkgndep_1.99.3.tar.gz ... checking reproducer_0.5.3.tar.gz ... checking spiralize_1.1.1.tar.gz ... checking GlobalOptions_0.1.3.tar.gz ... checking ProjectTemplate_0.11.2.tar.gz ... Depends: Package: GetoptLong Depends: R (>= 4.0.0) Imports: rjson, GlobalOptions (>= 0.1.0), methods, crayon Timings: user system elapsed GetoptLong 43.158 6.051 55.497 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 1 5 Check results summary: GetoptLong ... NOTE * checking CRAN incoming feasibility ... [4s/6s] NOTE rdepends_bsub ... OK rdepends_GlobalOptions ... OK rdepends_pkgndep ... NOTE * checking dependencies in R code ... NOTE rdepends_ProjectTemplate ... OK rdepends_reproducer ... OK rdepends_spiralize ... OK